-
Notifications
You must be signed in to change notification settings - Fork 36
Upcast sum aggregation results to prevent overflows #2244
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Merged
Merged
Changes from all commits
Commits
File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -368,11 +368,11 @@ class PyAgg { | |
| // Set the result data buffers | ||
| auto* res_buf = &result_buffers_[attr_name][agg_name]; | ||
| if ("count" == agg_name || "null_count" == agg_name || | ||
| "mean" == agg_name) { | ||
| "mean" == agg_name || "sum" == agg_name) { | ||
| // count and null_count use uint64 and mean uses float64 | ||
| *res_buf = py::array(py::dtype("uint8"), 8); | ||
| } else { | ||
| // max, min, and sum use the dtype of the attribute | ||
| // for max and min use the dtype of the attribute | ||
| py::dtype dt(tiledb_dtype(attr.type(), attr.cell_size())); | ||
| *res_buf = py::array(py::dtype("uint8"), dt.itemsize()); | ||
| } | ||
|
|
@@ -509,11 +509,35 @@ class PyAgg { | |
| if ("count" == agg_name || "null_count" == agg_name) | ||
| return py::cast(*((uint64_t*)agg_buf)); | ||
|
|
||
| // Handle sum operation with upcasting to int64/uint64/double | ||
| // This has to be done according to | ||
| // https://github.com/TileDB-Inc/TileDB/blob/d3c3e5f6c3b53b9c9153861e56db7363804da5cc/tiledb/sm/query/readers/aggregators/sum_type.h | ||
| if ("sum" == agg_name) { | ||
| switch (attr.type()) { | ||
| case TILEDB_INT8: | ||
| case TILEDB_INT16: | ||
| case TILEDB_INT32: | ||
| case TILEDB_INT64: | ||
| return py::cast(*((int64_t*)agg_buf)); | ||
| case TILEDB_UINT8: | ||
| case TILEDB_UINT16: | ||
| case TILEDB_UINT32: | ||
| case TILEDB_UINT64: | ||
| return py::cast(*((uint64_t*)agg_buf)); | ||
| case TILEDB_FLOAT32: | ||
| case TILEDB_FLOAT64: | ||
| return py::cast(*((double*)agg_buf)); | ||
| default: | ||
| TPY_ERROR_LOC( | ||
| "[_set_result] Invalid tiledb dtype for sum " | ||
| "aggregation result") | ||
| } | ||
| } | ||
|
|
||
| // Handle min/max operations with original data types | ||
| switch (attr.type()) { | ||
| case TILEDB_FLOAT32: | ||
| return py::cast( | ||
| "sum" == agg_name ? *((double*)agg_buf) : | ||
| *((float*)agg_buf)); | ||
| return py::cast(*((float*)agg_buf)); | ||
| case TILEDB_FLOAT64: | ||
| return py::cast(*((double*)agg_buf)); | ||
| case TILEDB_INT8: | ||
|
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Based on the research I did, I have every reason to believe that this is the cause of the random segmentation faults we sometimes encounter during our daily test runs. For sum operations, the sum aggregation should return specific upcasted types source |
||
|
|
@@ -534,8 +558,7 @@ class PyAgg { | |
| return py::cast(*((uint64_t*)agg_buf)); | ||
| default: | ||
| TPY_ERROR_LOC( | ||
| "[_cast_agg_result] Invalid tiledb dtype for aggregation " | ||
| "result") | ||
| "[_set_result] Invalid tiledb dtype for aggregation result") | ||
| } | ||
| } | ||
|
|
||
|
|
||
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Uh oh!
There was an error while loading. Please reload this page.