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Merged
merged 1 commit into from
Mar 29, 2021
Merged

Initial repo structure #1

merged 1 commit into from
Mar 29, 2021

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adsharma
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@kelvich
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kelvich commented Mar 26, 2021

Hm, I thought we agreed on top level repo beeing cargo workspace and only include postgres as a submodule

@adsharma
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Yes - that is still the idea. I was thinking that we could add a Cargo.toml file at the top level in a subsequent commit.

@adsharma
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You can either clone the pull request or browse around here:

https://github.com/adsharma/zenith

vendor/postgres is a submodule.

$ git submodule status
 e8790f4e62ab2d527ae89c0d4ad0582a17ae6876 cli (heads/main)
 46a7e72aad214c64f588d0430a3c2472ce95706d consensus (heads/main)
 bad55d4e1610e72e607e8f854c12063b8f51c37e pageserver (heads/main)
 ab596105b55f1d7fbd5a66b66f65227d210b047d vendor/postgres (heads/master) <--- I think you're asking about this
 3e1d859f7f185f5b3978215b1c007d7d61af0874 walkeeper (heads/main)

The postgres repo submodule tracks the zenith branch, which is currently the same as master.

@adsharma
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Re: shared code between pageserver and walkeeper

You can decide which repo to put it in and then refer to the shared module via a relative path in Cargo.toml of the other module.
Modules could be structured like:

wal
├── lib.rs
├── waldecoder.rs
├── walreceiver.rs
└── walredo.rs

@kelvich kelvich merged commit 05a7ea0 into neondatabase:main Mar 29, 2021
ericseppanen added a commit that referenced this pull request Apr 19, 2021
Resolve some basic warnings from clippy:
- useless conversion to the same type
- redundant field names in struct initialization
- redundant single-component path imports
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Orca Security Scan Summary

Status Check Issues by priority
Passed Passed Infrastructure as Code high 0   medium 254   low 665   info 131 View in Orca
Passed Passed Secrets high 0   medium 0   low 0   info 0 View in Orca
Passed Passed Vulnerabilities high 0   medium 0   low 0   info 0 View in Orca
🛡️ The following IaC misconfigurations have been detected
NAME FILE
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...ttp/openapi_spec.yml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
medium Array Without Maximum Number of Items (v3) ...tp/openapi_spec.yaml View in code
info Template Path With No Corresponding Path Parameter ...ttp/openapi_spec.yml View in code
info Template Path With No Corresponding Path Parameter ...ttp/openapi_spec.yml View in code
info Template Path With No Corresponding Path Parameter ...ttp/openapi_spec.yml View in code
info Schema JSON Reference Does Not Exists ...tp/openapi_spec.yaml View in code
info Unknown Property ...tp/openapi_spec.yaml View in code
info Unknown Property ...tp/openapi_spec.yaml View in code
... ... ... ...

vipvap pushed a commit that referenced this pull request Sep 12, 2024
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Orca Security Scan Summary

Status Check Issues by priority
Passed Passed Infrastructure as Code high 0   medium 254   low 666   info 131 View in Orca
Passed Passed Secrets high 0   medium 0   low 0   info 0 View in Orca
Passed Passed Vulnerabilities high 0   medium 0   low 0   info 0 View in Orca
🛡️ The following IaC misconfigurations have been detected
NAME FILE
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...e/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...m/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...m/docker-compose.yml View in code
medium Controller creating containers without dropped capabilities ...m/docker-compose.yml View in code
low Additional Properties Too Permissive ...tp/openapi_spec.yaml View in code
low Additional Properties Too Permissive ...tp/openapi_spec.yaml View in code
low Additional Properties Too Permissive ...tp/openapi_spec.yaml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...ttp/openapi_spec.yml View in code
low Additional Properties Too Permissive ...tp/openapi_spec.yaml View in code
... ... ... ...

problame added a commit that referenced this pull request Jan 14, 2025
This approach here doesn't work because it slows down all the responses.

the workload() thread gets stuck in auth, prob with zero pipeline depth

  0x00007fa28fe48e63 in epoll_wait () from /lib/x86_64-linux-gnu/libc.so.6
  (gdb) bt
  #0  0x00007fa28fe48e63 in epoll_wait () from /lib/x86_64-linux-gnu/libc.so.6
  #1  0x0000561a285bf44e in WaitEventSetWaitBlock (set=0x561a292723e8, cur_timeout=9999, occurred_events=0x7ffd1f11c970, nevents=1)
      at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/ipc/latch.c:1535
  #2  0x0000561a285bf338 in WaitEventSetWait (set=0x561a292723e8, timeout=9999, occurred_events=0x7ffd1f11c970, nevents=1, wait_event_info=117440512)
      at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/ipc/latch.c:1481
  #3  0x00007fa2904a7345 in call_PQgetCopyData (shard_no=0, buffer=0x7ffd1f11cad0) at /home/christian/src/neon//pgxn/neon/libpagestore.c:703
  #4  0x00007fa2904a7aec in pageserver_receive (shard_no=0) at /home/christian/src/neon//pgxn/neon/libpagestore.c:899
  #5  0x00007fa2904af471 in prefetch_read (slot=0x561a292863b0) at /home/christian/src/neon//pgxn/neon/pagestore_smgr.c:644
  #6  0x00007fa2904af26b in prefetch_wait_for (ring_index=0) at /home/christian/src/neon//pgxn/neon/pagestore_smgr.c:596
  #7  0x00007fa2904b489d in neon_read_at_lsnv (rinfo=..., forkNum=MAIN_FORKNUM, base_blockno=0, request_lsns=0x7ffd1f11cd60, buffers=0x7ffd1f11cd30, nblocks=1, mask=0x0)
      at /home/christian/src/neon//pgxn/neon/pagestore_smgr.c:3024
  #8  0x00007fa2904b4f34 in neon_read_at_lsn (rinfo=..., forkNum=MAIN_FORKNUM, blkno=0, request_lsns=..., buffer=0x7fa28b969000) at /home/christian/src/neon//pgxn/neon/pagestore_smgr.c:3104
  #9  0x00007fa2904b515d in neon_read (reln=0x561a292ef448, forkNum=MAIN_FORKNUM, blkno=0, buffer=0x7fa28b969000) at /home/christian/src/neon//pgxn/neon/pagestore_smgr.c:3146
  #10 0x0000561a285f1ed5 in smgrread (reln=0x561a292ef448, forknum=MAIN_FORKNUM, blocknum=0, buffer=0x7fa28b969000) at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/smgr/smgr.c:567
  #11 0x0000561a285a528a in ReadBuffer_common (smgr=0x561a292ef448, relpersistence=112 'p', forkNum=MAIN_FORKNUM, blockNum=0, mode=RBM_NORMAL, strategy=0x0, hit=0x7ffd1f11cf1b)
      at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/buffer/bufmgr.c:1134
  #12 0x0000561a285a47e3 in ReadBufferExtended (reln=0x7fa28ce1c888, forkNum=MAIN_FORKNUM, blockNum=0, mode=RBM_NORMAL, strategy=0x0)
      at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/buffer/bufmgr.c:781
  #13 0x0000561a285a46ad in ReadBuffer (reln=0x7fa28ce1c888, blockNum=0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/storage/buffer/bufmgr.c:715
  #14 0x0000561a2811d511 in _bt_getbuf (rel=0x7fa28ce1c888, blkno=0, access=1) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/nbtree/nbtpage.c:852
  #15 0x0000561a2811d1b2 in _bt_metaversion (rel=0x7fa28ce1c888, heapkeyspace=0x7ffd1f11d9f0, allequalimage=0x7ffd1f11d9f1) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/nbtree/nbtpage.c:747
  #16 0x0000561a28126220 in _bt_first (scan=0x561a292d0348, dir=ForwardScanDirection) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/nbtree/nbtsearch.c:1465
  #17 0x0000561a28121a07 in btgettuple (scan=0x561a292d0348, dir=ForwardScanDirection) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/nbtree/nbtree.c:246
  #18 0x0000561a28111afa in index_getnext_tid (scan=0x561a292d0348, direction=ForwardScanDirection) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/index/indexam.c:583
  #19 0x0000561a28111d14 in index_getnext_slot (scan=0x561a292d0348, direction=ForwardScanDirection, slot=0x561a292d01a8) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/index/indexam.c:675
  #20 0x0000561a2810fbcc in systable_getnext (sysscan=0x561a292d0158) at /home/christian/src/neon//vendor/postgres-v16/src/backend/access/index/genam.c:512
  #21 0x0000561a287a1ee1 in SearchCatCacheMiss (cache=0x561a292a0f80, nkeys=1, hashValue=3028463561, hashIndex=1, v1=94670359561576, v2=0, v3=0, v4=0)
      at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/cache/catcache.c:1440
  #22 0x0000561a287a1d8a in SearchCatCacheInternal (cache=0x561a292a0f80, nkeys=1, v1=94670359561576, v2=0, v3=0, v4=0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/cache/catcache.c:1360
  #23 0x0000561a287a1a4f in SearchCatCache (cache=0x561a292a0f80, v1=94670359561576, v2=0, v3=0, v4=0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/cache/catcache.c:1214
  #24 0x0000561a287be060 in SearchSysCache (cacheId=10, key1=94670359561576, key2=0, key3=0, key4=0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/cache/syscache.c:817
  #25 0x0000561a287be66f in GetSysCacheOid (cacheId=10, oidcol=1, key1=94670359561576, key2=0, key3=0, key4=0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/cache/syscache.c:1055
  #26 0x0000561a286319a5 in get_role_oid (rolname=0x561a29270568 "cloud_admin", missing_ok=true) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/adt/acl.c:5251
  #27 0x0000561a283d42ca in check_hba (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/libpq/hba.c:2493
  #28 0x0000561a283d5537 in hba_getauthmethod (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/libpq/hba.c:3067
  #29 0x0000561a283c6fd7 in ClientAuthentication (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/libpq/auth.c:395
  #30 0x0000561a287dc943 in PerformAuthentication (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/init/postinit.c:247
  #31 0x0000561a287dd9cd in InitPostgres (in_dbname=0x561a29270588 "postgres", dboid=0, username=0x561a29270568 "cloud_admin", useroid=0, load_session_libraries=true, override_allow_connections=false,
      out_dbname=0x0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/utils/init/postinit.c:929
  #32 0x0000561a285fa10b in PostgresMain (dbname=0x561a29270588 "postgres", username=0x561a29270568 "cloud_admin") at /home/christian/src/neon//vendor/postgres-v16/src/backend/tcop/postgres.c:4293
  #33 0x0000561a28524ce4 in BackendRun (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/postmaster/postmaster.c:4465
  #34 0x0000561a285245da in BackendStartup (port=0x561a29268de0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/postmaster/postmaster.c:4193
  #35 0x0000561a285209c4 in ServerLoop () at /home/christian/src/neon//vendor/postgres-v16/src/backend/postmaster/postmaster.c:1782
  #36 0x0000561a2852030f in PostmasterMain (argc=3, argv=0x561a291c5fc0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/postmaster/postmaster.c:1466
  #37 0x0000561a283dd987 in main (argc=3, argv=0x561a291c5fc0) at /home/christian/src/neon//vendor/postgres-v16/src/backend/main/main.c:238
github-merge-queue bot pushed a commit that referenced this pull request Feb 6, 2025
## Problem

Found another pgcopydb segfault in error handling

```bash
2025-02-06 15:30:40.112 51299 ERROR  pgsql.c:2330              [TARGET -738302813] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51298 ERROR  pgsql.c:2330              [TARGET -1407749748] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51297 ERROR  pgsql.c:2330              [TARGET -2073308066] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51300 ERROR  pgsql.c:2330              [TARGET 1220908650] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.432 51300 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.513 51290 ERROR  copydb.c:773              Sub-process 51300 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:40.578 51299 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.613 51290 ERROR  copydb.c:773              Sub-process 51299 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:41.253 51298 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:41.314 51290 ERROR  copydb.c:773              Sub-process 51298 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:43.133 51297 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:43.215 51290 ERROR  copydb.c:773              Sub-process 51297 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:43.215 51290 ERROR  indexes.c:123             Some INDEX worker process(es) have exited with error, see above for details
2025-02-06 15:30:43.215 51290 ERROR  indexes.c:59              Failed to create indexes, see above for details
2025-02-06 15:30:43.232 51271 ERROR  copydb.c:768              Sub-process 51290 exited with code 12
```

```bashadmin@ip-172-31-38-164:~/pgcopydb$ gdb /usr/local/pgsql/bin/pgcopydb core
GNU gdb (Debian 13.1-3) 13.1
Copyright (C) 2023 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
Type "show copying" and "show warranty" for details.
This GDB was configured as "aarch64-linux-gnu".
Type "show configuration" for configuration details.
For bug reporting instructions, please see:
<https://www.gnu.org/software/gdb/bugs/>.
Find the GDB manual and other documentation resources online at:
    <http://www.gnu.org/software/gdb/documentation/>.

For help, type "help".
Type "apropos word" to search for commands related to "word"...
Reading symbols from /usr/local/pgsql/bin/pgcopydb...
[New LWP 51297]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/aarch64-linux-gnu/libthread_db.so.1".
Core was generated by `pgcopydb: create index ocr.ocr_pipeline_step_results_version_pkey             '.
Program terminated with signal SIGSEGV, Segmentation fault.
#0  0x0000aaaac3a4b030 in splitLines (lbuf=lbuf@entry=0xffffd8b86930, buffer=<optimized out>) at string_utils.c:630
630				*newLinePtr = '\0';
(gdb) bt
#0  0x0000aaaac3a4b030 in splitLines (lbuf=lbuf@entry=0xffffd8b86930, buffer=<optimized out>) at string_utils.c:630
#1  0x0000aaaac3a3a678 in pgsql_execute_log_error (pgsql=pgsql@entry=0xffffd8b87040, result=result@entry=0x0, 
    sql=sql@entry=0xffff81fe9be0 "CREATE UNIQUE INDEX IF NOT EXISTS ocr_pipeline_step_results_version_pkey ON ocr.ocr_pipeline_step_results_version USING btree (id, transaction_id);", 
    debugParameters=debugParameters@entry=0xaaaaec5f92f0, context=context@entry=0x0) at pgsql.c:2322
#2  0x0000aaaac3a3bbec in pgsql_execute_with_params (pgsql=pgsql@entry=0xffffd8b87040, 
    sql=0xffff81fe9be0 "CREATE UNIQUE INDEX IF NOT EXISTS ocr_pipeline_step_results_version_pkey ON ocr.ocr_pipeline_step_results_version USING btree (id, transaction_id);", paramCount=paramCount@entry=0, 
    paramTypes=paramTypes@entry=0x0, paramValues=paramValues@entry=0x0, context=context@entry=0x0, parseFun=parseFun@entry=0x0) at pgsql.c:1649
#3  0x0000aaaac3a3c468 in pgsql_execute (pgsql=pgsql@entry=0xffffd8b87040, sql=<optimized out>) at pgsql.c:1522
#4  0x0000aaaac3a245f4 in copydb_create_index (specs=specs@entry=0xffffd8b8ec98, dst=dst@entry=0xffffd8b87040, index=index@entry=0xffff81f71800, ifNotExists=<optimized out>) at indexes.c:846
#5  0x0000aaaac3a24ca8 in copydb_create_index_by_oid (specs=specs@entry=0xffffd8b8ec98, dst=dst@entry=0xffffd8b87040, indexOid=<optimized out>) at indexes.c:410
#6  0x0000aaaac3a25040 in copydb_index_worker (specs=specs@entry=0xffffd8b8ec98) at indexes.c:297
#7  0x0000aaaac3a25238 in copydb_start_index_workers (specs=specs@entry=0xffffd8b8ec98) at indexes.c:209
#8  0x0000aaaac3a252f4 in copydb_index_supervisor (specs=specs@entry=0xffffd8b8ec98) at indexes.c:112
#9  0x0000aaaac3a253f4 in copydb_start_index_supervisor (specs=0xffffd8b8ec98) at indexes.c:57
#10 copydb_start_index_supervisor (specs=specs@entry=0xffffd8b8ec98) at indexes.c:34
#11 0x0000aaaac3a51ff4 in copydb_process_table_data (specs=specs@entry=0xffffd8b8ec98) at table-data.c:146
#12 0x0000aaaac3a520dc in copydb_copy_all_table_data (specs=specs@entry=0xffffd8b8ec98) at table-data.c:69
#13 0x0000aaaac3a0ccd8 in cloneDB (copySpecs=copySpecs@entry=0xffffd8b8ec98) at cli_clone_follow.c:602
#14 0x0000aaaac3a0d2cc in start_clone_process (pid=0xffffd8b743d8, copySpecs=0xffffd8b8ec98) at cli_clone_follow.c:502
#15 start_clone_process (copySpecs=copySpecs@entry=0xffffd8b8ec98, pid=pid@entry=0xffffd8b89788) at cli_clone_follow.c:482
#16 0x0000aaaac3a0d52c in cli_clone (argc=<optimized out>, argv=<optimized out>) at cli_clone_follow.c:164
#17 0x0000aaaac3a53850 in commandline_run (command=command@entry=0xffffd8b9eb88, argc=0, argc@entry=22, argv=0xffffd8b9edf8, argv@entry=0xffffd8b9ed48) at /home/admin/pgcopydb/src/bin/pgcopydb/../lib/subcommands.c/commandline.c:71
#18 0x0000aaaac3a01464 in main (argc=22, argv=0xffffd8b9ed48) at main.c:140
(gdb) 

```

The problem is most likely that the following call returned a message in
a read-only memory segment where we cannot replace \n with \0 in
string_utils.c splitLines() function
```C
char *message = PQerrorMessage(pgsql->connection);
```

## Summary of changes

modified the patch to also address this problem
knizhnik pushed a commit that referenced this pull request Feb 10, 2025
## Problem

Found another pgcopydb segfault in error handling

```bash
2025-02-06 15:30:40.112 51299 ERROR  pgsql.c:2330              [TARGET -738302813] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51298 ERROR  pgsql.c:2330              [TARGET -1407749748] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51297 ERROR  pgsql.c:2330              [TARGET -2073308066] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.112 51300 ERROR  pgsql.c:2330              [TARGET 1220908650] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.432 51300 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.513 51290 ERROR  copydb.c:773              Sub-process 51300 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:40.578 51299 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:40.613 51290 ERROR  copydb.c:773              Sub-process 51299 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:41.253 51298 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:41.314 51290 ERROR  copydb.c:773              Sub-process 51298 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:43.133 51297 ERROR  pgsql.c:2536              [Postgres] FATAL:  terminating connection due to administrator command
2025-02-06 15:30:43.215 51290 ERROR  copydb.c:773              Sub-process 51297 exited with code 0 and signal Segmentation fault
2025-02-06 15:30:43.215 51290 ERROR  indexes.c:123             Some INDEX worker process(es) have exited with error, see above for details
2025-02-06 15:30:43.215 51290 ERROR  indexes.c:59              Failed to create indexes, see above for details
2025-02-06 15:30:43.232 51271 ERROR  copydb.c:768              Sub-process 51290 exited with code 12
```

```bashadmin@ip-172-31-38-164:~/pgcopydb$ gdb /usr/local/pgsql/bin/pgcopydb core
GNU gdb (Debian 13.1-3) 13.1
Copyright (C) 2023 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
Type "show copying" and "show warranty" for details.
This GDB was configured as "aarch64-linux-gnu".
Type "show configuration" for configuration details.
For bug reporting instructions, please see:
<https://www.gnu.org/software/gdb/bugs/>.
Find the GDB manual and other documentation resources online at:
    <http://www.gnu.org/software/gdb/documentation/>.

For help, type "help".
Type "apropos word" to search for commands related to "word"...
Reading symbols from /usr/local/pgsql/bin/pgcopydb...
[New LWP 51297]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/aarch64-linux-gnu/libthread_db.so.1".
Core was generated by `pgcopydb: create index ocr.ocr_pipeline_step_results_version_pkey             '.
Program terminated with signal SIGSEGV, Segmentation fault.
#0  0x0000aaaac3a4b030 in splitLines (lbuf=lbuf@entry=0xffffd8b86930, buffer=<optimized out>) at string_utils.c:630
630				*newLinePtr = '\0';
(gdb) bt
#0  0x0000aaaac3a4b030 in splitLines (lbuf=lbuf@entry=0xffffd8b86930, buffer=<optimized out>) at string_utils.c:630
#1  0x0000aaaac3a3a678 in pgsql_execute_log_error (pgsql=pgsql@entry=0xffffd8b87040, result=result@entry=0x0, 
    sql=sql@entry=0xffff81fe9be0 "CREATE UNIQUE INDEX IF NOT EXISTS ocr_pipeline_step_results_version_pkey ON ocr.ocr_pipeline_step_results_version USING btree (id, transaction_id);", 
    debugParameters=debugParameters@entry=0xaaaaec5f92f0, context=context@entry=0x0) at pgsql.c:2322
#2  0x0000aaaac3a3bbec in pgsql_execute_with_params (pgsql=pgsql@entry=0xffffd8b87040, 
    sql=0xffff81fe9be0 "CREATE UNIQUE INDEX IF NOT EXISTS ocr_pipeline_step_results_version_pkey ON ocr.ocr_pipeline_step_results_version USING btree (id, transaction_id);", paramCount=paramCount@entry=0, 
    paramTypes=paramTypes@entry=0x0, paramValues=paramValues@entry=0x0, context=context@entry=0x0, parseFun=parseFun@entry=0x0) at pgsql.c:1649
#3  0x0000aaaac3a3c468 in pgsql_execute (pgsql=pgsql@entry=0xffffd8b87040, sql=<optimized out>) at pgsql.c:1522
#4  0x0000aaaac3a245f4 in copydb_create_index (specs=specs@entry=0xffffd8b8ec98, dst=dst@entry=0xffffd8b87040, index=index@entry=0xffff81f71800, ifNotExists=<optimized out>) at indexes.c:846
#5  0x0000aaaac3a24ca8 in copydb_create_index_by_oid (specs=specs@entry=0xffffd8b8ec98, dst=dst@entry=0xffffd8b87040, indexOid=<optimized out>) at indexes.c:410
#6  0x0000aaaac3a25040 in copydb_index_worker (specs=specs@entry=0xffffd8b8ec98) at indexes.c:297
#7  0x0000aaaac3a25238 in copydb_start_index_workers (specs=specs@entry=0xffffd8b8ec98) at indexes.c:209
#8  0x0000aaaac3a252f4 in copydb_index_supervisor (specs=specs@entry=0xffffd8b8ec98) at indexes.c:112
#9  0x0000aaaac3a253f4 in copydb_start_index_supervisor (specs=0xffffd8b8ec98) at indexes.c:57
#10 copydb_start_index_supervisor (specs=specs@entry=0xffffd8b8ec98) at indexes.c:34
#11 0x0000aaaac3a51ff4 in copydb_process_table_data (specs=specs@entry=0xffffd8b8ec98) at table-data.c:146
#12 0x0000aaaac3a520dc in copydb_copy_all_table_data (specs=specs@entry=0xffffd8b8ec98) at table-data.c:69
#13 0x0000aaaac3a0ccd8 in cloneDB (copySpecs=copySpecs@entry=0xffffd8b8ec98) at cli_clone_follow.c:602
#14 0x0000aaaac3a0d2cc in start_clone_process (pid=0xffffd8b743d8, copySpecs=0xffffd8b8ec98) at cli_clone_follow.c:502
#15 start_clone_process (copySpecs=copySpecs@entry=0xffffd8b8ec98, pid=pid@entry=0xffffd8b89788) at cli_clone_follow.c:482
#16 0x0000aaaac3a0d52c in cli_clone (argc=<optimized out>, argv=<optimized out>) at cli_clone_follow.c:164
#17 0x0000aaaac3a53850 in commandline_run (command=command@entry=0xffffd8b9eb88, argc=0, argc@entry=22, argv=0xffffd8b9edf8, argv@entry=0xffffd8b9ed48) at /home/admin/pgcopydb/src/bin/pgcopydb/../lib/subcommands.c/commandline.c:71
#18 0x0000aaaac3a01464 in main (argc=22, argv=0xffffd8b9ed48) at main.c:140
(gdb) 

```

The problem is most likely that the following call returned a message in
a read-only memory segment where we cannot replace \n with \0 in
string_utils.c splitLines() function
```C
char *message = PQerrorMessage(pgsql->connection);
```

## Summary of changes

modified the patch to also address this problem
github-merge-queue bot pushed a commit that referenced this pull request Mar 6, 2025
…11097)

## Problem

Original Slack discussion:
https://neondb.slack.com/archives/C04DGM6SMTM/p1739915430147169

TL;DR in Postgres, it's totally normal to have 'invalid' DBs (state
after the interrupted `DROP DATABASE`). Yet, some of our metrics
collected with `sql_exporter` try to get the size of such invalid DBs.

Typical log lines:
```
time=2025-03-05T16:30:32.368Z level=ERROR source=promhttp.go:52 msg="Error gathering metrics" error="[from Gatherer #1] [collector=neon_collector,query=pg_stats_userdb] pq: [NEON_SMGR] [reqid 0] could not read db size of db 173228 from page server at lsn 0/44A0E8C0"
time=2025-03-05T16:30:32.369Z level=ERROR source=promhttp.go:52 msg="Error gathering metrics" error="[from Gatherer #1] [collector=neon_collector,query=db_total_size] pq: [NEON_SMGR] [reqid 0] could not read db size of db 173228 from page server at lsn 0/44A0E8C0"
```

## Summary of changes

Ignore invalid DBs in these two metrics -- `pg_stats_userdb` and
`db_total_size`
github-merge-queue bot pushed a commit that referenced this pull request May 8, 2025
… in download function (#11812)

## Problem
At the moment, remote_client and target are recreated in download
function. We could reuse it from SnapshotDownloader instance. This isn't
a problem per se, just a quality of life improvement but it caught my
attention when we were trying out snapshot downloading in one of the
older version and ran into a curious case of s3 clients behaving in two
different manners. One client that used `force_path_style` and other one
didn't.

**Logs from this run:**
```
2025-05-02T12:56:22.384626Z DEBUG /data/snappie/2739e7da34e625e3934ef0b76fa12483/timelines/d44b831adb0a6ba96792dc3a5cc30910/000000000000000000000000000000000000-FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF__00000000014E8F20-00000000014E8F99-00000001 requires download...
2025-05-02T12:56:22.384689Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:apply_configuration: timeout settings for this operation: TimeoutConfig { connect_timeout: Set(3.1s), read_timeout: Disabled, operation_timeout: Disabled, operation_attempt_timeout: Disabled }
2025-05-02T12:56:22.384730Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op: entering 'serialization' phase
2025-05-02T12:56:22.384784Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op: entering 'before transmit' phase
2025-05-02T12:56:22.384813Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op: retry strategy has OKed initial request
2025-05-02T12:56:22.384841Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op: beginning attempt #1
2025-05-02T12:56:22.384870Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: resolving endpoint endpoint_params=EndpointResolverParams(TypeErasedBox[!Clone]:Params { bucket: Some("bucket"), region: Some("eu-north-1"), use_fips: false, use_dual_stack: false, endpoint: Some("https://s3.self-hosted.company.com"), force_path_style: false, accelerate: false, use_global_endpoint: false, use_object_lambda_endpoint: None, key: None, prefix: Some("/pageserver/tenants/2739e7da34e625e3934ef0b76fa12483/timelines/d44b831adb0a6ba96792dc3a5cc30910/000000000000000000000000000000000000-FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF__00000000014E8F20-00000000014E8F99-00000001"), copy_source: None, disable_access_points: None, disable_multi_region_access_points: false, use_arn_region: None, use_s3_express_control_endpoint: None, disable_s3_express_session_auth: None }) endpoint_prefix=None
2025-05-02T12:56:22.384979Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: will use endpoint Endpoint { url: "https://neon.s3.self-hosted.company.com", headers: {}, properties: {"authSchemes": Array([Object({"signingRegion": String("eu-north-1"), "disableDoubleEncoding": Bool(true), "name": String("sigv4"), "signingName": String("s3")})])} }
2025-05-02T12:56:22.385042Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt:lazy_load_identity:provide_credentials{provider=default_chain}: loaded credentials provider=Environment
2025-05-02T12:56:22.385066Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt:lazy_load_identity: identity cache miss occurred; added new identity (took 35.958µs) new_expiration=2025-05-02T13:11:22.385028Z valid_for=899.999961437s partition=IdentityCachePartition(5)
2025-05-02T12:56:22.385090Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: loaded identity
2025-05-02T12:56:22.385162Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: entering 'transmit' phase
2025-05-02T12:56:22.385211Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: new TCP connector created in 361ns
2025-05-02T12:56:22.385288Z DEBUG resolving host="neon.s3.self-hosted.company.com"
2025-05-02T12:56:22.390796Z DEBUG invoke{service=s3 operation=ListObjectVersions sdk_invocation_id=7315885}:try_op:try_attempt: encountered orchestrator error; halting
```
github-merge-queue bot pushed a commit that referenced this pull request Jul 3, 2025
## TLDR
This PR is a no-op. The changes are disabled by default. 

## Problem
I. Currently we don't have a way to detect disk I/O failures from WAL
operations.

II.
We observe that the offloader fails to upload a segment due to race
conditions on XLOG SWITCH and PG start streaming WALs. wal_backup task
continously failing to upload a full segment while the segment remains
partial on the disk.

The consequence is that commit_lsn for all SKs move forward but
backup_lsn stays the same. Then, all SKs run out of disk space.

III.
We have discovered SK bugs where the WAL offload owner cannot keep up
with WAL backup/upload to S3, which results in an unbounded accumulation
of WAL segment files on the Safekeeper's disk until the disk becomes
full. This is a somewhat dangerous operation that is hard to recover
from because the Safekeeper cannot write its control files when it is
out of disk space. There are actually 2 problems here:

1. A single problematic timeline can take over the entire disk for the
SK
2. Once out of disk, it's difficult to recover SK


IV. 
Neon reports certain storage errors as "critical" errors using a marco,
which will increment a counter/metric that can be used to raise alerts.
However, this metric isn't sliced by tenant and/or timeline today. We
need the tenant/timeline dimension to better respond to incidents and
for blast radius analysis.

## Summary of changes
I. 
The PR adds a `safekeeper_wal_disk_io_errors ` which is incremented when
SK fails to create or flush WALs.

II. 
To mitigate this issue, we will re-elect a new offloader if the current
offloader is lagging behind too much.
Each SK makes the decision locally but they are aware of each other's
commit and backup lsns.

The new algorithm is
- determine_offloader will pick a SK. say SK-1.
- Each SK checks
-- if commit_lsn - back_lsn > threshold,
-- -- remove SK-1 from the candidate and call determine_offloader again.

SK-1 will step down and all SKs will elect the same leader again.
After the backup is caught up, the leader will become SK-1 again.

This also helps when SK-1 is slow to backup. 

I'll set the reelect backup lag to 4 GB later. Setting to 128 MB in dev
to trigger the code more frequently.

III. 
This change addresses problem no. 1 by having the Safekeeper perform a
timeline disk utilization check check when processing WAL proposal
messages from Postgres/compute. The Safekeeper now rejects the WAL
proposal message, effectively stops writing more WAL for the timeline to
disk, if the existing WAL files for the timeline on the SK disk exceeds
a certain size (the default threshold is 100GB). The disk utilization is
calculated based on a `last_removed_segno` variable tracked by the
background task removing WAL files, which produces an accurate and
conservative estimate (>= than actual disk usage) of the actual disk
usage.


IV.
* Add a new metric `hadron_critical_storage_event_count` that has the
`tenant_shard_id` and `timeline_id` as dimensions.
* Modified the `crtitical!` marco to include tenant_id and timeline_id
as additional arguments and adapted existing call sites to populate the
tenant shard and timeline ID fields. The `critical!` marco invocation
now increments the `hadron_critical_storage_event_count` with the extra
dimensions. (In SK there isn't the notion of a tenant-shard, so just the
tenant ID is recorded in lieu of tenant shard ID.)

I considered adding a separate marco to avoid merge conflicts, but I
think in this case (detecting critical errors) conflicts are probably
more desirable so that we can be aware whenever Neon adds another
`critical!` invocation in their code.

---------

Co-authored-by: Chen Luo <[email protected]>
Co-authored-by: Haoyu Huang <[email protected]>
Co-authored-by: William Huang <[email protected]>
github-merge-queue bot pushed a commit that referenced this pull request Jul 8, 2025
# TLDR
All changes are no-op except 
1. publishing additional metrics. 
2. problem VI

## Problem I

It has come to my attention that the Neon Storage Controller doesn't
correctly update its "observed" state of tenants previously associated
with PSs that has come back up after a local data loss. It would still
think that the old tenants are still attached to page servers and won't
ask more questions. The pageserver has enough information from the
reattach request/response to tell that something is wrong, but it
doesn't do anything about it either. We need to detect this situation in
production while I work on a fix.

(I think there is just some misunderstanding about how Neon manages
their pageserver deployments which got me confused about all the
invariants.)

## Summary of changes I

Added a `pageserver_local_data_loss_suspected` gauge metric that will be
set to 1 if we detect a problematic situation from the reattch response.
The problematic situation is when the PS doesn't have any local tenants
but received a reattach response containing tenants.

We can set up an alert using this metric. The alert should be raised
whenever this metric reports non-zero number.

Also added a HTTP PUT
`http://pageserver/hadron-internal/reset_alert_gauges` API on the
pageserver that can be used to reset the gauge and the alert once we
manually rectify the situation (by restarting the HCC).

## Problem II
Azure upload is 3x slower than AWS. -> 3x slower ingestion. 

The reason for the slower upload is that Azure upload in page server is
much slower => higher flush latency => higher disk consistent LSN =>
higher back pressure.

## Summary of changes II
Use Azure put_block API to uploads a 1 GB layer file in 8 blocks in
parallel.

I set the put_block block size to be 128 MB by default in azure config. 

To minimize neon changes, upload function passes the layer file path to
the azure upload code through the storage metadata. This allows the
azure put block to use FileChunkStreamRead to stream read from one
partition in the file instead of loading all file data in memory and
split it into 8 128 MB chunks.

## How is this tested? II
1. rust test_real_azure tests the put_block change. 
3. I deployed the change in azure dev and saw flush latency reduces from
~30 seconds to 10 seconds.
4. I also did a bunch of stress test using sqlsmith and 100 GB TPCDS
runs.

## Problem III
Currently Neon limits the compaction tasks as 3/4 * CPU cores. This
limits the overall compaction throughput and it can easily cause
head-of-the-line blocking problems when a few large tenants are
compacting.

## Summary of changes III
This PR increases the limit of compaction tasks as `BG_TASKS_PER_THREAD`
(default 4) * CPU cores. Note that `CONCURRENT_BACKGROUND_TASKS` also
limits some other tasks `logical_size_calculation` and `layer eviction`
. But compaction should be the most frequent and time-consuming task.

## Summary of changes IV
This PR adds the following PageServer metrics:
1. `pageserver_disk_usage_based_eviction_evicted_bytes_total`: captures
the total amount of bytes evicted. It's more straightforward to see the
bytes directly instead of layers.
2. `pageserver_active_storage_operations_count`: captures the active
storage operation, e.g., flush, L0 compaction, image creation etc. It's
useful to visualize these active operations to get a better idea of what
PageServers are spending cycles on in the background.

## Summary of changes V
When investigating data corruptions, it's useful to search the base
image and all WAL records of a page up to an LSN, i.e., a breakdown of
GetPage@LSN request. This PR implements this functionality with two
tools:

1. Extended `pagectl` with a new command to search the layer files for a
given key up to a given LSN from the `index_part.json` file. The output
can be used to download the files from S3 and then search the file
contents using the second tool.
Example usage:
```
cargo run --bin pagectl index-part search --tenant-id 09b99ea3239bbb3b2d883a59f087659d --timeline-id 7bedf4a6995baff7c0421ff9aebbcdab --path ~/Downloads/corruption/index_part.json-0000000c-formatted --key 000000067F000080140000802100000D61BD --lsn 70C/BF3D61D8
```
Example output:
```
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F0000801400008028000002FEFF__000007089F0B5381-0000070C7679EEB9-0000000c
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000000000000000000000000000000000-000000067F0000801400008028000002F3F1__000006DD95B6F609-000006E2BA14C369-0000000c
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F000080140000802100001B0973__000006D33429F539-000006DD95B6F609-0000000c
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F00008014000080210000164D81__000006C6343B2D31-000006D33429F539-0000000b
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F0000801400008021000017687B__000006BA344FA7F1-000006C6343B2D31-0000000b
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F00008014000080210000165BAB__000006AD34613D19-000006BA344FA7F1-0000000b
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F0000801400000B180000000002-000000067F00008014000080210000137A39__0000069F34773461-000006AD34613D19-0000000b
tenants/09b99ea3239bbb3b2d883a59f087659d-0304/timelines/7bedf4a6995baff7c0421ff9aebbcdab/000000067F000080140000802100000D4000-000000067F000080140000802100000F0000__0000069F34773460-0000000b
```

2. Added a unit test to search the layer file contents. It's not
implemented part of `pagectl` because it depends on some test harness
code, which can only be used by unit tests.

Example usage:
```
cargo test --package pageserver --lib -- tenant::debug::test_search_key --exact --nocapture -- --tenant-id 09b99ea3239bbb3b2d883a59f087659d --timeline-id 7bedf4a6995baff7c0421ff9aebbcdab --data-dir /Users/chen.luo/Downloads/corruption --key 000000067F000080140000802100000D61BD --lsn 70C/BF3D61D8
```
Example output:
```
# omitted image for brievity
delta: 69F/769D8180: will_init: false, "OgAAALGkuwXwYp12nwYAAECGAAASIqLHAAAAAH8GAAAUgAAAIYAAAL1hDQD/DLGkuwUDAAAAEAAWAA=="
delta: 69F/769CB6D8: will_init: false, "PQAAALGkuwXotZx2nwYAABAJAAAFk7tpACAGAH8GAAAUgAAAIYAAAL1hDQD/CQUAEAASALExuwUBAAAAAA=="
```

## Problem VI
Currently when page service resolves shards from page numbers, it
doesn't fully support the case that the shard could be split in the
middle. This will lead to query failures during the tenant split for
either commit or abort cases (it's mostly for abort).

## Summary of changes VI
This PR adds retry logic in `Cache::get()` to deal with shard resolution
errors more gracefully. Specifically, it'll clear the cache and retry,
instead of failing the query immediately. It also reduces the internal
timeout to make retries faster.

The PR also fixes a very obvious bug in
`TenantManager::resolve_attached_shard` where the code tries to cache
the computed the shard number, but forgot to recompute when the shard
count is different.

---------

Co-authored-by: William Huang <[email protected]>
Co-authored-by: Haoyu Huang <[email protected]>
Co-authored-by: Chen Luo <[email protected]>
Co-authored-by: Vlad Lazar <[email protected]>
Co-authored-by: Vlad Lazar <[email protected]>
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