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The current status of NIRS support can be seen in this tutorial.
Here is a rough plan for the development of fNIRS processing in MNE.
Refactor existing code:
- Use write wavelengths to
info['chs'][ii][loc][9]in addition to the channel name - Use the
info['chs'][ii][loc][9]value rather than channel names in preprocessing
Integrate fNIRS to existing MNE functions:
- Add support for hbo/hbr to
plot_topomap - Add support for hbo/hbr to
plot_joint
Channel quality measures:
- Scalp coupling index. (WIP: Add scalp coupling index for NIRS data #7215)
Add overlapping channel support to (these may already work with code changes I made, but don't have tests if they aren't ticked):
- topomap (MRG: Take mean of nirs channels that are too close for topoplot #7414 )
- PSD topomap
- ICA topomap
- TFR topomap
- Projs topomap
Movement correction
Interpolation of bad channels:
- Replace with nearest
- More intelligent interpolation
File support:
- Add SNIRF reader MRG: Add SNIRF reader #7972
- Add SNIRF writer
- Add BIDS support
- Add NIRSport1 file reader
- Add NIRSport2 file reader (low priority as device will soon export in SNIRF format)
- Add Artinis file reader
Implement HRF GLM style analysis Moved to MNE-NIRS till mature enough to merge in
Source Analysis Moved to MNE-NIRS till mature enough to merge in
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