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Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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matt-sd-watson/README.md

Hi there 👋

I am a programmer/software developer with the LTRI at Mount Sinai (Toronto, Canada) working jointly with the Campbell and Jackson groups with experience in:

🐍 programming and software development
📌 Data science/analysis
📷 high dimensional multiplexed imaging
♋ cancer genomics
🐛 public health pathogen analysis
💻 multi-omics


🔬 software development/programming, data analysis, CI/CD
🎓 MSc. Data Science, University of Texas at Austin




GitHub Streak


Check out some of my software packages!

🐟 rakaia
🍄 spora
📊 cytomarker


Public projects that I have contributed to!

🦔 pangolin
🌲 ggtree
🔎 civet/civet3
⚡ snipit
📶 infercnv
🐐 steinbock

Pinned Loading

  1. camlab-bioml/rakaia camlab-bioml/rakaia Public

    🎇 Scale interactive spatial omics in the browser to thousands of images | https://rakaia.io/

    Python 11 1

  2. camlab-bioml/cytomarker camlab-bioml/cytomarker Public

    Interactive design and validation of antibody panels using single-cell atlases

    R 4

  3. spora spora Public

    🍄 spora: Streamlined Phylogenomic Outbreak Report Analysis

    Python 5

  4. FASTAfurious FASTAfurious Public

    🏎️ Bundled utilities for manipulation and integration of FASTA files

    Python 6