-
Notifications
You must be signed in to change notification settings - Fork 2.6k
Adds support for PBS job scheduler based clusters #605
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Merged
Merged
Changes from all commits
Commits
Show all changes
20 commits
Select commit
Hold shift + click to select a range
dc0785b
Adds support for PBS job scheduler based clusters
shafeef901 940b781
Cleaner job submission script
shafeef901 77ff96b
Adds documentation
shafeef901 08943e0
Formatting code
shafeef901 7bc5f1b
Merge branch 'isaac-sim:main' into pbs-cluster
shafeef901 9f5199e
Merge branch 'main' into pbs-cluster
shafeef901 5d81afe
Creates seperate job scripts for each cluster scheduler
shafeef901 d454167
Formatting
shafeef901 c24d2c8
Merge branch 'pbs-cluster' of github.com:shafeef901/IsaacLab into pbs…
shafeef901 a201e2a
Merge branch 'main' into pbs-cluster
shafeef901 9d9eb92
Removed redundant line in PBS job script
shafeef901 2360011
Merge branch 'pbs-cluster' of github.com:shafeef901/IsaacLab into pbs…
shafeef901 52bf4e9
Better readable code
shafeef901 e31a637
Doc update
shafeef901 d91a48d
Merge branch 'main' into pbs-cluster
shafeef901 65e17a3
Apply suggestions from code review
shafeef901 937d102
Apply suggestions from code review
shafeef901 9a0e766
Merge branch 'isaac-sim:main' into pbs-cluster
shafeef901 6833aca
Update cluster.rst
shafeef901 5cd9257
Update cluster.rst
shafeef901 File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,23 @@ | ||
| #!/usr/bin/env bash | ||
|
|
||
| # in the case you need to load specific modules on the cluster, add them here | ||
| # e.g., `module load eth_proxy` | ||
|
|
||
| # create job script with compute demands | ||
| ### MODIFY HERE FOR YOUR JOB ### | ||
| cat <<EOT > job.sh | ||
| #!/bin/bash | ||
|
|
||
| #PBS -l select=1:ncpus=8:mpiprocs=1:ngpus=1 | ||
| #PBS -l walltime=01:00:00 | ||
| #PBS -j oe | ||
| #PBS -q gpu | ||
| #PBS -N isaaclab | ||
| #PBS -m bea -M "user@mail" | ||
|
|
||
| # Pass the container profile first to run_singularity.sh, then all arguments intended for the executed script | ||
| sh "$1/docker/cluster/run_singularity.sh" "$2" "${@:3}" | ||
| EOT | ||
|
|
||
| qsub job.sh | ||
| rm job.sh |
File renamed without changes.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Uh oh!
There was an error while loading. Please reload this page.