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Pull requests: galaxyproject/iwc

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Pull requests list

Fixes to layout and tweaks for how to run tab
#1012 opened Oct 30, 2025 by dannon Loading…
12 tasks
1
new workflow for downloading ena data
#1009 opened Oct 29, 2025 by nekrut Loading…
11 of 12 tasks
@mvdbeek
Updating workflows/VGP-assembly-v2/Assembly-Hifi-HiC-phasing-VGP4 from 0.4 to 0.5
#1006 opened Oct 27, 2025 by gxydevbot Loading…
Add simple diploid variant calling workflow
#1005 opened Oct 25, 2025 by mvdbeek Loading…
12 tasks
2
Genes catalogue build workflow from metagenomic raw reads data
#995 opened Oct 14, 2025 by hugolefeuvre Loading…
3 of 12 tasks
4
Updating workflows/virology/pox-virus-amplicon from 0.4 to 0.5
#994 opened Oct 13, 2025 by gxydevbot Loading…
1
Updating workflows/scRNAseq/fastq-to-matrix-10x from 0.6.3 to 0.6.4
#993 opened Oct 13, 2025 by gxydevbot Loading…
Updating workflows/VGP-assembly-v2/Scaffolding-HiC-VGP8 from 3.1 to 3.2
#992 opened Oct 13, 2025 by gxydevbot Loading…
Add 2 workflows (long and short-reads) for host and contamination removal from microbiome data
#991 opened Oct 9, 2025 by bebatut Loading…
3 of 12 tasks
1
Updating workflows/scRNAseq/velocyto from 0.2 to 0.3
#986 opened Oct 8, 2025 by gxydevbot Loading…
Updating workflows/metabolomics/lcms-preprocessing from 1.1 to 1.2
#984 opened Oct 8, 2025 by gxydevbot Loading…
1
Updating workflows/imaging/tissue-microarray-analysis/tissue-microarray-analysis from 0.1.1 to 0.1.2
#983 opened Oct 8, 2025 by gxydevbot Loading…
Updating workflows/imaging/tissue-microarray-analysis/multiplex-tissue-microarray-analysis from 0.1.1 to 0.1.2
#982 opened Oct 8, 2025 by gxydevbot Loading…
Updating workflows/genome-assembly/bacterial-genome-assembly from 2.0 to 2.1
#979 opened Oct 7, 2025 by gxydevbot Loading…
Updating workflows/bacterial_genomics/bacterial_genome_annotation from 1.1.11 to 1.1.12
#978 opened Oct 7, 2025 by gxydevbot Loading…
1
Updating workflows/bacterial_genomics/amr_gene_detection from 1.1.6 to 1.1.7
#977 opened Oct 7, 2025 by gxydevbot Loading…
Add short-read QC & trimming workflow
#976 opened Oct 7, 2025 by bebatut Loading…
3 of 12 tasks
5
Update MAGs workflow to 0.4
#975 opened Oct 7, 2025 by paulzierep Loading…
3 tasks done
5
Updating workflows/genome-assembly/assembly-with-flye from 0.3 to 0.4
#972 opened Oct 6, 2025 by gxydevbot Loading…
Updating workflows/epigenetics/hic-hicup-cooler from 0.3 to 0.4
#971 opened Oct 6, 2025 by gxydevbot Loading…
1
Updating workflows/bacterial_genomics/bacterial-quality-and-contamination-control-post-assembly from 1.0.1 to 1.0.2
#970 opened Oct 6, 2025 by gxydevbot Loading…
1
Updating workflows/VGP-assembly-v2/Purge-duplicates-one-haplotype-VGP6b from 0.8.4 to 0.8.5
#969 opened Oct 6, 2025 by gxydevbot Loading…
Updating workflows/VGP-assembly-v2/Purge-duplicate-contigs-VGP6 from 0.10.4 to 0.10.5
#968 opened Oct 6, 2025 by gxydevbot Loading…
Updating workflows/VGP-assembly-v2/Assembly-Hifi-only-VGP3 from 0.3.4 to 0.3.5
#967 opened Oct 6, 2025 by gxydevbot Loading…
1
Updating workflows/VGP-assembly-v2/Assembly-Hifi-Trio-phasing-VGP5 from 0.9.9 to 0.9.10
#966 opened Oct 6, 2025 by gxydevbot Loading…
1
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