ERROR: Package Sundials errored during testing

[iajzenszmi]

:: ERROR: Incorrect usage: this script must be sourced.

usage: source setvars.sh [--force] [--config=file] [--help] [...]
--force Force setvars.sh to re-run, doing so may overload environment.
--config=file Customize env vars using a setvars.sh configuration file.
--help Display this help message and exit.
... Additional args are passed to individual env/vars.sh scripts
and should follow this script's arguments.

Some POSIX shells do not accept command-line options. In that case, you can pass
command-line options via the SETVARS_ARGS environment variable. For example:

$ SETVARS_ARGS="ia32 --config=config.txt" ; export SETVARS_ARGS
$ . path/to/setvars.sh

The SETVARS_ARGS environment variable is cleared on exiting setvars.sh.

:: initializing oneAPI environment ...
bash: BASH_VERSION = 5.1.16(1)-release
args: Using "$@" for setvars.sh arguments:
:: advisor -- latest
:: ccl -- latest
:: compiler -- latest
:: dal -- latest
:: debugger -- latest
:: dev-utilities -- latest
:: dnnl -- latest
:: dpcpp-ct -- latest
:: dpl -- latest
:: intelpython -- latest
:: ipp -- latest
:: ippcp -- latest
:: ipp -- latest
:: mkl -- latest
:: mpi -- latest
:: tbb -- latest
:: vtune -- latest
:: oneAPI environment initialized ::

ian@ian-HP-Convertible-x360-11-ab1XX:~$ julia
_
_ _ ()_ | Documentation: https://docs.julialang.org
() | () () |
_ _ | | __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ ` | |
| | || | | | (| | | Version 1.8.5 (2023-01-08)
/ |_'|||_'_| | Official https://julialang.org/ release
|__/ |

(@v1.8) pkg> add https://github.com/SciML/Sundials.jl
Cloning git-repo https://github.com/SciML/Sundials.jl
Updating git-repo https://github.com/SciML/Sundials.jl
Updating registry at ~/.julia/registries/General.toml
Resolving package versions...
ERROR: Unsatisfiable requirements detected for package Compat [34da2185]:
Compat [34da2185] log:
├─possible versions are: 1.0.0-4.6.0 or uninstalled
├─restricted to versions * by an explicit requirement, leaving only versions 1.0.0-4.6.0
├─restricted by compatibility requirements with FortranFiles [c58ffaec] to vers
│ ├─restricted to versions * by an explicit requirement, leaving only versions 0.5.0-0.6.0
│ └─restricted by compatibility requirements with ClimateTasks [1a49d507] to versions: 0.5.0
│ └─ClimateTasks [1a49d507] log:
│ ├─possible versions are: 0.1.0-0.1.1 or uninstalled
│ └─restricted to versions * by an explicit requirement, leaving only versions 0.1.0-0.1.1
└─restricted by compatibility requirements with DataStructures [864edb3b] to versions: 3.0.0-4.6.0 — no versions left
└─DataStructures [864edb3b] log:
├─possible versions are: 0.9.0-0.18.13 or uninstalled
└─restricted to versions 0.18 by Sundials [c3572dad], leaving only versions 0.18.0-0.18.13
└─Sundials [c3572dad] log:
├─possible versions are: 4.15.0 or uninstalled
└─Sundials [c3572dad] is fixed to version 4.15.0

(@v1.8) pkg> add Sundials.jl
Resolving package versions...
Installed Sundials_jll ─ v5.2.1+0
Installed Sundials ───── v4.2.6
Downloaded artifact: Sundials
Updating ~/.julia/environments/v1.8/Project.toml
⌃ [c3572dad] + Sundials v4.2.6
Updating ~/.julia/environments/v1.8/Manifest.toml
⌃ [c3572dad] + Sundials v4.2.6
[fb77eaff] + Sundials_jll v5.2.1+0
[bea87d4a] + SuiteSparse_jll v5.10.1+0
Info Packages marked with ⌃ have new versions available and may be upgradable.
Precompiling project...
3 dependencies successfully precompiled in 10 seconds. 361 already precompiled. 1 skipped during auto due to previous errors.

(@v1.8) pkg> test Sundials.jl
Testing Sundials
Status /tmp/jl_rz68Qt/Project.toml
[fa961155] CEnum v0.4.2
⌅ [864edb3b] DataStructures v0.17.20
⌃ [2b5f629d] DiffEqBase v6.44.3
⌃ [9fdde737] DiffEqOperators v4.14.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[f6369f11] ForwardDiff v0.10.34
⌅ [189a3867] Reexport v0.2.0
⌃ [c3572dad] Sundials v4.2.6
[fb77eaff] Sundials_jll v5.2.1+0
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[2f01184e] SparseArrays @stdlib/SparseArrays
[8dfed614] Test @stdlib/Test
Status /tmp/jl_rz68Qt/Manifest.toml
⌅ [1520ce14] AbstractTrees v0.3.4
[79e6a3ab] Adapt v3.5.0
⌅ [4fba245c] ArrayInterface v2.14.17
⌅ [4c555306] ArrayLayouts v0.4.7
⌅ [aae01518] BandedMatrices v0.15.21
[9e28174c] BinDeps v1.0.2
[b99e7846] BinaryProvider v0.5.10
⌅ [8e7c35d0] BlockArrays v0.12.12
⌅ [ffab5731] BlockBandedMatrices v0.9.2
[fa961155] CEnum v0.4.2
[a603d957] CanonicalTraits v0.2.4
⌅ [d360d2e6] ChainRulesCore v0.9.45
[38540f10] CommonSolve v0.2.3
[bbf7d656] CommonSubexpressions v0.3.0
⌅ [34da2185] Compat v2.2.1
[88cd18e8] ConsoleProgressMonitor v0.1.2
[187b0558] ConstructionBase v1.4.1
[a8cc5b0e] Crayons v4.1.1
[9a962f9c] DataAPI v1.14.0
⌅ [864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
⌃ [2b5f629d] DiffEqBase v6.44.3
[eb300fae] DiffEqBiological v4.3.0
⌅ [c894b116] DiffEqJump v6.10.0
⌃ [9fdde737] DiffEqOperators v4.14.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[163ba53b] DiffResults v1.1.0
⌃ [b552c78f] DiffRules v1.5.0
⌅ [ffbed154] DocStringExtensions v0.8.6
[497a8b3b] DoubleFloats v1.2.3
⌅ [7c1d4256] DynamicPolynomials v0.3.21
[fdbdab4c] ElasticArrays v1.2.11
⌅ [1a297f60] FillArrays v0.9.7
[3dd14ad9] FixedPolynomials v0.4.0
[59287772] Formatting v0.4.2
[f6369f11] ForwardDiff v0.10.34
[069b7b12] FunctionWrappers v1.1.3
⌅ [6b9d7cbe] GeneralizedGenerated v0.2.8
[14197337] GenericLinearAlgebra v0.3.5
⌅ [f213a82b] HomotopyContinuation v1.4.4
[92d709cd] IrrationalConstants v0.1.1
⌅ [42fd0dbc] IterativeSolvers v0.8.5
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.4.1
[b14d175d] JuliaVariables v0.2.4
[b964fa9f] LaTeXStrings v1.3.0
⌃ [2ee39098] LabelledArrays v1.6.6
⌅ [23fbe1c1] Latexify v0.13.5
⌅ [5078a376] LazyArrays v0.18.1
⌅ [d7e5e226] LazyBandedMatrices v0.3.6
⌃ [1d6d02ad] LeftChildRightSiblingTrees v0.1.3
⌃ [2ab3a3ac] LogExpFunctions v0.3.0
⌅ [e6f89c97] LoggingExtras v0.4.9
[d8e11817] MLStyle v0.4.16
[1914dd2f] MacroTools v0.5.10
⌅ [a3b82374] MatrixFactorizations v0.6.1
[291d046c] MixedSubdivisions v1.1.2
⌅ [961ee093] ModelingToolkit v2.0.0
[46d2c3a1] MuladdMacro v0.2.4
⌅ [102ac46a] MultivariatePolynomials v0.3.18
⌅ [d8a4904e] MutableArithmetics v0.2.22
⌅ [872c559c] NNlib v0.7.11
⌅ [77ba4419] NaNMath v0.3.7
[71a1bf82] NameResolution v0.1.5
[bac558e1] OrderedCollections v1.4.1
[d96e819e] Parameters v0.12.3
[e409e4f3] PoissonRandom v0.4.3
[f27b6e38] Polynomials v3.2.4
[21216c6a] Preferences v1.3.0
[8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v0.9.1
[33c8b6b6] ProgressLogging v0.1.4
[92933f4c] ProgressMeter v1.7.2
[01f381cc] ProjectiveVectors v1.1.3
[be4d8f0f] Quadmath v0.5.6
[e6cf234a] RandomNumbers v1.5.3
[3cdcf5f2] RecipesBase v1.3.3
⌃ [731186ca] RecursiveArrayTools v2.11.4
⌅ [f2c3362d] RecursiveFactorization v0.1.0
⌅ [189a3867] Reexport v0.2.0
[ae029012] Requires v1.3.0
⌅ [f2b01f46] Roots v1.4.1
[1bc83da4] SafeTestsets v0.0.1
⌅ [efcf1570] Setfield v0.8.2
[66db9d55] SnoopPrecompile v1.0.3
⌅ [276daf66] SpecialFunctions v0.8.0
⌅ [90137ffa] StaticArrays v0.12.5
[1e83bf80] StaticArraysCore v1.4.0
[62e018b1] StaticPolynomials v1.3.6
⌃ [c3572dad] Sundials v4.2.6
[123dc426] SymEngine v0.8.7
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.10.0
[5d786b92] TerminalLoggers v0.1.6
[a2a6695c] TreeViews v0.3.0
[30578b45] URIParser v0.4.1
[3a884ed6] UnPack v1.0.2
[1986cc42] Unitful v1.12.2
[700de1a5] ZygoteRules v0.2.2
[2ce0c516] MPC_jll v1.2.1+0
[fb77eaff] Sundials_jll v5.2.1+0
⌅ [3428059b] SymEngine_jll v0.8.1+0
[0dad84c5] ArgTools v1.1.1 @stdlib/ArgTools
[56f22d72] Artifacts @stdlib/Artifacts
[2a0f44e3] Base64 @stdlib/Base64
[ade2ca70] Dates @stdlib/Dates
[8bb1440f] DelimitedFiles @stdlib/DelimitedFiles
[8ba89e20] Distributed @stdlib/Distributed
[f43a241f] Downloads v1.6.0 @stdlib/Downloads
[7b1f6079] FileWatching @stdlib/FileWatching
[9fa8497b] Future @stdlib/Future
[b77e0a4c] InteractiveUtils @stdlib/InteractiveUtils
[b27032c2] LibCURL v0.6.3 @stdlib/LibCURL
[76f85450] LibGit2 @stdlib/LibGit2
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[d6f4376e] Markdown @stdlib/Markdown
[a63ad114] Mmap @stdlib/Mmap
[ca575930] NetworkOptions v1.2.0 @stdlib/NetworkOptions
[44cfe95a] Pkg v1.8.0 @stdlib/Pkg
[de0858da] Printf @stdlib/Printf
[3fa0cd96] REPL @stdlib/REPL
[9a3f8284] Random @stdlib/Random
[ea8e919c] SHA v0.7.0 @stdlib/SHA
[9e88b42a] Serialization @stdlib/Serialization
[1a1011a3] SharedArrays @stdlib/SharedArrays
[6462fe0b] Sockets @stdlib/Sockets
[2f01184e] SparseArrays @stdlib/SparseArrays
[10745b16] Statistics @stdlib/Statistics
[4607b0f0] SuiteSparse @stdlib/SuiteSparse
[fa267f1f] TOML v1.0.0 @stdlib/TOML
[a4e569a6] Tar v1.10.1 @stdlib/Tar
[8dfed614] Test @stdlib/Test
[cf7118a7] UUIDs @stdlib/UUIDs
[4ec0a83e] Unicode @stdlib/Unicode
[e66e0078] CompilerSupportLibraries_jll v1.0.1+0 @stdlib/CompilerSupportLibraries_jll
[781609d7] GMP_jll v6.2.1+2 @stdlib/GMP_jll
[deac9b47] LibCURL_jll v7.84.0+0 @stdlib/LibCURL_jll
[29816b5a] LibSSH2_jll v1.10.2+0 @stdlib/LibSSH2_jll
[3a97d323] MPFR_jll v4.1.1+1 @stdlib/MPFR_jll
[c8ffd9c3] MbedTLS_jll v2.28.0+0 @stdlib/MbedTLS_jll
[14a3606d] MozillaCACerts_jll v2022.2.1 @stdlib/MozillaCACerts_jll
[4536629a] OpenBLAS_jll v0.3.20+0 @stdlib/OpenBLAS_jll
[bea87d4a] SuiteSparse_jll v5.10.1+0 @stdlib/SuiteSparse_jll
[83775a58] Zlib_jll v1.2.12+3 @stdlib/Zlib_jll
[8e850b90] libblastrampoline_jll v5.1.1+0 @stdlib/libblastrampoline_jll
[8e850ede] nghttp2_jll v1.48.0+0 @stdlib/nghttp2_jll
[3f19e933] p7zip_jll v17.4.0+0 @stdlib/p7zip_jll
Info Packages marked with ⌃ and ⌅ have new versions available, but those with ⌅ are restricted by compatibility constraints from upgrading.
Precompiling project...
22 dependencies successfully precompiled in 57 seconds. 89 already precompiled.
Testing Running tests...
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
T=0.4, Y=[0.9899652943580929, 3.470564190666435e-5, 0.01]
roots=Int32[0, 1]
T=0.4, Y=[0.9851640906722351, 3.386241699325715e-5, 0.014802046910771114]
T=4.0, Y=[0.905509670307843, 2.2403378846050117e-5, 0.09446792631331014]
T=40.0, Y=[0.7158015797469233, 9.185043328931088e-6, 0.28418923520974726]
T=400.0, Y=[0.450520872333455, 3.2228257877077353e-6, 0.5494759048407565]
T=4000.0, Y=[0.18322169164077126, 8.943516144954548e-7, 0.8167774140076135]
T=40000.0, Y=[0.03898091132304715, 1.6216688934655267e-7, 0.9610189265100634]
T=400000.0, Y=[0.004936971391576565, 1.9844502466172285e-8, 0.9950630087639206]
T=4.0e6, Y=[0.000517010320204611, 2.0690977989759934e-9, 0.9994829876106978]
T=4.0e7, Y=[9.999999999999992e-5, 4.00039528747344e-10, 0.9998999995999602]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204926760391501e-5, 2.0820776359257418e-10, 0.9999479505241882]
T=4.0e8, Y=[5.1849463049478235e-6, 2.0739891508302815e-11, 0.9999948150329551]
T=4.0e9, Y=[5.246211769412839e-7, 2.0984858346733178e-12, 0.9999994753767246]
T=4.0e10, Y=[6.043455470531721e-8, 2.41738235380483e-13, 0.9999999395652039]
Test Summary: |Time
CVODE | None 4.2s
T=0.4, Y=[0.9899652943718806, 3.4705628119662186e-5, 0.010000000000000002]
roots=Int32[0, 1]
T=0.4, Y=[0.9851707623122912, 3.386371656828505e-5, 0.01479537397114059]
T=4.0, Y=[0.905504728443, 2.24030741323827e-5, 0.09447286848286832]
T=40.0, Y=[0.7158418984108803, 9.18611950214165e-6, 0.28414891546961757]
T=400.0, Y=[0.45053789128414773, 3.2231511100131788e-6, 0.5494588855647428]
T=4000.0, Y=[0.18319969949401854, 8.942143972152571e-7, 0.8167994062915845]
T=40000.0, Y=[0.03898368270418011, 1.6217829385405389e-7, 0.961016155117526]
T=400000.0, Y=[0.004938675705664536, 1.9851554310243408e-8, 0.9950613044427804]
T=4.0e6, Y=[0.0005168882453198716, 2.0686115064850063e-9, 0.9994831096860654]
T=4.0e7, Y=[9.999999999999961e-5, 4.000395220229231e-10, 0.9998999995999603]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204772673773428e-5, 2.082016191813889e-10, 0.9999479520650584]
T=4.0e8, Y=[5.205357160257339e-6, 2.0821535763759906e-11, 0.9999947946220188]
T=4.0e9, Y=[5.190800207426813e-7, 2.0763211473603463e-12, 0.9999994809179029]
T=4.0e10, Y=[5.1177736621238506e-8, 2.0471095704096025e-13, 0.9999999488220589]
Test Summary: |Time
IDA | None 1.8s
T=0.4, Y=[0.9851721138377025, 3.386406120817996e-5, 0.014794022101089307]
T=4.0, Y=[0.9055186785328794, 2.2404781805334787e-5, 0.09445891668531428]
T=40.0, Y=[0.715827068739702, 9.185512472082487e-6, 0.28416374574782616]
T=400.0, Y=[0.45051866843284366, 3.222907159344263e-6, 0.5494781086599967]
T=4000.0, Y=[0.18320225667994575, 8.94230214472978e-7, 0.8167968490898406]
T=40000.0, Y=[0.0389833781311506, 1.6217923841619925e-7, 0.9610164596896126]
T=400000.0, Y=[0.004938279580768946, 1.9855397711492742e-8, 0.9950617005638343]
T=4.0e6, Y=[0.0005168084668713924, 2.0682376749441686e-9, 0.9994831894648913]
T=4.0e7, Y=[5.2030933038364054e-5, 2.081716637615316e-10, 0.9999479688587902]
T=4.0e8, Y=[5.207732919999157e-6, 2.0835595834773645e-11, 0.9999947922462442]
T=4.0e9, Y=[5.208288315326947e-7, 2.0901392725744845e-12, 0.9999994791690782]
T=4.0e10, Y=[5.208387679883955e-8, 2.076755627255998e-13, 0.9999999479159154]
Test Summary: | Pass Total Time
ARK | 23 23 1.3s
Solution: [0.7861540663366059, 0.6180344478352109]
Residual: [4.794728554635697e-6, -3.7681823696900096e-6]
Test Summary: | Pass Total Time
Kinsol | 2 2 0.8s
Test Summary: | Pass Total Time
Handle Tests | 13 13 0.5s
┌ Warning: the implicit keyword argument filter_modules=(:Base, :SpecialFunctions, :NaNMath) in diffrules() is deprecated and will be changed to filter_modules=nothing in an upcoming breaking release of DiffRules (i.e., diffrules() will return all rules defined in DiffRules)
│ caller = top-level scope at differentials.jl:99
└ @ Core ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:99
┌ Warning: the implicit keyword argument filter_modules=(:Base, :SpecialFunctions, :NaNMath) in diffrules() is deprecated and will be changed to filter_modules=nothing in an upcoming breaking release of DiffRules (i.e., diffrules() will return all rules defined in DiffRules)
│ caller = top-level scope at function_registration.jl:33
└ @ Core ~/.julia/packages/ModelingToolkit/N4mo2/src/function_registration.jl:33
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
CVODE: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
Got exception outside of a @test
LoadError: ArgumentError: internal representation does not support non-call Expr
Stacktrace:
[1] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:3
[2] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[3] _broadcast_getindex
@ ./broadcast.jl:653 [inlined]
[4] getindex
@ ./broadcast.jl:597 [inlined]
[5] copy
@ ./broadcast.jl:899 [inlined]
[6] materialize
@ ./broadcast.jl:860 [inlined]
[7] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:6
[8] derivative(#unused#::typeof(^), args::Tuple{ModelingToolkit.Operation, ModelingToolkit.Constant}, #unused#::Val{2})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:106
[9] derivative(O::ModelingToolkit.Operation, idx::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:94
[10] (::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential})(i::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:51
[11] _mapreduce(f::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential}, op::typeof(Base.add_sum), #unused#::IndexLinear, A::UnitRange{Int64})
@ Base ./reduce.jl:435
[12] _mapreduce_dim(f::Function, op::Function, #unused#::Base._InitialValue, A::UnitRange{Int64}, #unused#::Colon)
@ Base ./reducedim.jl:365
[13] #mapreduce#765
@ ./reducedim.jl:357 [inlined]
[14] mapreduce
@ ./reducedim.jl:357 [inlined]
[15] #_sum#775
@ ./reducedim.jl:999 [inlined]
[16] _sum
@ ./reducedim.jl:999 [inlined]
[17] #sum#773
@ ./reducedim.jl:995 [inlined]
[18] sum(f::Function, a::UnitRange{Int64})
@ Base ./reducedim.jl:995
[19] expand_derivatives(O::ModelingToolkit.Operation)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:50
--- the last 10 lines are repeated 4 more times ---
[60] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[61] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[62] getindex
@ ./broadcast.jl:597 [inlined]
[63] copy
@ ./broadcast.jl:899 [inlined]
[64] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{2}, Nothing, typeof(ModelingToolkit.expand_derivatives), Tuple{Matrix{ModelingToolkit.Expression}}})
@ Base.Broadcast ./broadcast.jl:860
[65] calculate_jacobian(sys::ModelingToolkit.ODESystem)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:18
[66] generate_jacobian(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}, expression::Type; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:43
[67] generate_jacobian
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:42 [inlined]
[68] (ODEFunction{true})(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}; version::Nothing, tgrad::Bool, jac::Bool, Wfact::Bool)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:139
[69] #ODEFunction#79
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:111 [inlined]
[70] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
[71] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[72] include(x::String)
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3
[73] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
[74] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[75] include
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3 [inlined]
[76] importodeproblems()
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:5
[77] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3
[78] include(fname::String)
@ Base.MainInclude ./client.jl:476
[79] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32 [inlined]
[80] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
--- the last 2 lines are repeated 1 more time ---
[83] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[84] include(fname::String)
@ Base.MainInclude ./client.jl:476
[85] top-level scope
@ none:6
[86] eval
@ ./boot.jl:368 [inlined]
[87] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3

[ARKode::ARKStep ERROR] ARKStepSetMaxNonlinIters
No SUNNonlinearSolver object is present

[ Info: Multiple abstol
[ Info: Band solver
[ Info: GMRES solver
[ Info: TFQMR solver

[IDAS ERROR] IDASolve
At t = 864.652 and h = 0.000120543, the corrector convergence failed repeatedly or with |h| = hmin.

[ Info: FGMRES solver
[ Info: PCG solver
[ Info: GMRES for identity preconditioner
[ Info: GMRES with pset
[ Info: IDA with saveat
[ Info: IDA with saveat everystep
[ Info: IDA with tstops
With consistent initial conditions:
With inconsistent initial conditions:
Jacobians: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:35
Got exception outside of a @test
LoadError: ArgumentError: Illegal buffers for SparseMatrixCSC construction 2 [1, 1, 1] [0, 0, 0, 0] [0.0, 0.0, 0.0, 0.0]
Stacktrace:
[1] SparseMatrixCSC
@ /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:29 [inlined]
[2] SparseMatrixCSC(m::Int64, n::Int64, colptr::Vector{Int64}, rowval::Vector{Int64}, nzval::Vector{Float64})
@ SparseArrays /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:44
[3] convert(#unused#::Type{SparseMatrixCSC}, J::Ptr{Sundials._generic_SUNMatrix})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/types_and_consts_additions.jl:50
[4] cvodejac(t::Float64, u::Ptr{Sundials._generic_N_Vector}, du::Ptr{Sundials._generic_N_Vector}, _J::Ptr{Sundials._generic_SUNMatrix}, funjac::Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, tmp1::Ptr{Sundials._generic_N_Vector}, tmp2::Ptr{Sundials._generic_N_Vector}, tmp3::Ptr{Sundials._generic_N_Vector})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/function_types.jl:66
[5] CVode
@ ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:166 [inlined]
[6] CVode(cvode_mem::Sundials.Handle{Sundials.CVODEMem}, tout::Float64, yout::Vector{Float64}, tret::Vector{Float64}, itask::Int32)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:171
[7] solver_step(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing}, tstop::Float64)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1099
[8] solve!(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1164
[9] __solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, alg::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, timeseries::Vector{Any}, ts::Vector{Any}, ks::Vector{Any}, recompile::Type{Val{true}}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:12
[10] __solve (repeats 5 times)
@ ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:3 [inlined]
[11] solve_call(_prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}; merge_callbacks::Bool, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:92
[12] solve_call
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:64 [inlined]
[13] #solve_up#467
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:114 [inlined]
[14] solve_up
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:105 [inlined]
[15] #solve#466
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:102 [inlined]
[16] solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:98
[17] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[18] include(fname::String)
@ Base.MainInclude ./client.jl:476
[19] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[20] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[21] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[22] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[23] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[24] include(fname::String)
@ Base.MainInclude ./client.jl:476
[25] top-level scope
@ none:6
[26] eval
@ ./boot.jl:368 [inlined]
[27] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
[28] _start()
@ Base ./client.jl:522
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[ Info: 0.044464449958102746
[ Info: 0.1199702927305579
[ Info: 0.19547613550301304
[ Info: 0.2709819782754682
[ Info: 0.34648782104792336
[ Info: 0.4219936638203785
[ Info: 0.5889202251875935
[ Info: 0.7558467865548084
[ Info: 0.9227733479220234
[ Info: 1.0
Test error handling

[CVODES WARNING] CVode
Internal t = 0 and h = 0 are such that t + h = t on the next step. The solver will continue anyway.

[CVODES ERROR] CVode
At t = 0 and h = 0, the corrector convergence test failed repeatedly or with |h| = hmin.

[IDAS ERROR] IDACalcIC
Newton/Linesearch algorithm failed to converge.

Test Summary: | Pass Error Total Time
Common Interface | 20 2 22 3m48.0s
CVODE | 1 1 58.8s
ARKODE | 4 4 37.1s
IDA | 7 7 1m13.4s
Jacobians | 1 1 2 7.1s
Callbacks | 6 6 18.9s
Iterator | None 2.7s
Errors | 1 1 11.0s
Mass Matrix | 1 1 19.0s
ERROR: LoadError: Some tests did not pass: 20 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:31
ERROR: Package Sundials errored during testing

(@v1.8) pkg> ^C

julia>

[ChrisRackauckas]

Is this Julia version from https://julialang.org/downloads/ or juliaup? Or is it from something like the Arch Linux package manager?

[iajzenszmi]

This Julia version is from https://julialang.org/ version 1.8.5 2023-01-08) Documentation: https://docs.julialang.org
() | () () |
_ _ | | __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ ` | |
| | || | | | (| | | Version 1.8.5 (2023-01-08)
/ |_'|||_'_| | Official https://julialang.org/ release

[ChrisRackauckas]

Can you update your packages to the most recent version. What's holding back Compat? Do ]add Compat@4. Whatever is holding that back is breaking your entire environment and hasn't been updated in almost half a decade.

[iajzenszmi]

] add Compat@4 has been entered and ] test Sundials.jl has taken place. No change.

:: ERROR: Incorrect usage: this script must be sourced.

usage: source setvars.sh [--force] [--config=file] [--help] [...]
--force Force setvars.sh to re-run, doing so may overload environment.
--config=file Customize env vars using a setvars.sh configuration file.
--help Display this help message and exit.
... Additional args are passed to individual env/vars.sh scripts
and should follow this script's arguments.

Some POSIX shells do not accept command-line options. In that case, you can pass
command-line options via the SETVARS_ARGS environment variable. For example:

$ SETVARS_ARGS="ia32 --config=config.txt" ; export SETVARS_ARGS
$ . path/to/setvars.sh

The SETVARS_ARGS environment variable is cleared on exiting setvars.sh.

:: initializing oneAPI environment ...
bash: BASH_VERSION = 5.1.16(1)-release
args: Using "$@" for setvars.sh arguments:
:: advisor -- latest
:: ccl -- latest
:: compiler -- latest
:: dal -- latest
:: debugger -- latest
:: dev-utilities -- latest
:: dnnl -- latest
:: dpcpp-ct -- latest
:: dpl -- latest
:: intelpython -- latest
:: ipp -- latest
:: ippcp -- latest
:: ipp -- latest
:: mkl -- latest
:: mpi -- latest
:: tbb -- latest
:: vtune -- latest
:: oneAPI environment initialized ::

ian@ian-HP-Convertible-x360-11-ab1XX:~$ julia
_
_ _ ()_ | Documentation: https://docs.julialang.org
() | () () |
_ _ | | __ _ | Type "?" for help, "]?" for Pkg help.
| | | | | | |/ ` | |
| | || | | | (| | | Version 1.8.5 (2023-01-08)
/ |_'|||_'_| | Official https://julialang.org/ release
|__/ |

(@v1.8) pkg> add Compat@4
Updating registry at ~/.julia/registries/General.toml
Resolving package versions...
ERROR: Unsatisfiable requirements detected for package JLD [4138dd39]:
JLD [4138dd39] log:
├─possible versions are: 0.9.0-0.13.3 or uninstalled
├─restricted by compatibility requirements with Compat [34da2185] to versions: [0.10.0-0.12.3, 0.13.2-0.13.3] or uninstalled
│ └─Compat [34da2185] log:
│ ├─possible versions are: 1.0.0-4.6.0 or uninstalled
│ └─restricted to versions 4 by an explicit requirement, leaving only versions 4.1.0-4.6.0
└─restricted by compatibility requirements with ClimateTasks [1a49d507] to versions: 0.9.1-0.9.2 — no versions left
└─ClimateTasks [1a49d507] log:
├─possible versions are: 0.1.0-0.1.1 or uninstalled
└─restricted to versions * by an explicit requirement, leaving only versions 0.1.0-0.1.1

(@v1.8) pkg> add Compat@4.6
Resolving package versions...
ERROR: Unsatisfiable requirements detected for package JLD [4138dd39]:
JLD [4138dd39] log:
├─possible versions are: 0.9.0-0.13.3 or uninstalled
├─restricted by compatibility requirements with Compat [34da2185] to versions: [0.10.0-0.12.3, 0.13.2-0.13.3] or uninstalled
│ └─Compat [34da2185] log:
│ ├─possible versions are: 1.0.0-4.6.0 or uninstalled
│ └─restricted to versions 4.6 by an explicit requirement, leaving only versions 4.6.0
└─restricted by compatibility requirements with ClimateTasks [1a49d507] to versions: 0.9.1-0.9.2 — no versions left
└─ClimateTasks [1a49d507] log:
├─possible versions are: 0.1.0-0.1.1 or uninstalled
└─restricted to versions * by an explicit requirement, leaving only versions 0.1.0-0.1.1

(@v1.8) pkg> build Compat

(@v1.8) pkg> add Sundials
Resolving package versions...
No Changes to ~/.julia/environments/v1.8/Project.toml
No Changes to ~/.julia/environments/v1.8/Manifest.toml

(@v1.8) pkg> test Sundials
Testing Sundials
Status /tmp/jl_kWkRQ3/Project.toml
[fa961155] CEnum v0.4.2
⌅ [864edb3b] DataStructures v0.17.20
⌃ [2b5f629d] DiffEqBase v6.44.3
⌃ [9fdde737] DiffEqOperators v4.12.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[f6369f11] ForwardDiff v0.10.34
⌅ [189a3867] Reexport v0.2.0
⌃ [c3572dad] Sundials v4.2.6
[fb77eaff] Sundials_jll v5.2.1+0
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[2f01184e] SparseArrays @stdlib/SparseArrays
[8dfed614] Test @stdlib/Test
Status /tmp/jl_kWkRQ3/Manifest.toml
⌅ [1520ce14] AbstractTrees v0.3.4
[79e6a3ab] Adapt v3.5.0
⌅ [4fba245c] ArrayInterface v2.14.17
⌅ [4c555306] ArrayLayouts v0.3.8
⌅ [aae01518] BandedMatrices v0.15.15
[9e28174c] BinDeps v1.0.2
[b99e7846] BinaryProvider v0.5.10
⌅ [8e7c35d0] BlockArrays v0.12.11
⌅ [ffab5731] BlockBandedMatrices v0.8.11
[fa961155] CEnum v0.4.2
[a603d957] CanonicalTraits v0.2.4
⌅ [d360d2e6] ChainRulesCore v0.9.45
[38540f10] CommonSolve v0.2.3
[bbf7d656] CommonSubexpressions v0.3.0
⌅ [34da2185] Compat v2.2.1
[88cd18e8] ConsoleProgressMonitor v0.1.2
[187b0558] ConstructionBase v1.4.1
[a8cc5b0e] Crayons v4.1.1
[9a962f9c] DataAPI v1.14.0
⌅ [864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
⌃ [2b5f629d] DiffEqBase v6.44.3
[eb300fae] DiffEqBiological v4.3.0
⌅ [c894b116] DiffEqJump v6.10.0
⌃ [9fdde737] DiffEqOperators v4.12.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[163ba53b] DiffResults v1.1.0
⌃ [b552c78f] DiffRules v1.5.0
⌅ [ffbed154] DocStringExtensions v0.8.6
[497a8b3b] DoubleFloats v1.2.3
⌅ [7c1d4256] DynamicPolynomials v0.3.21
[fdbdab4c] ElasticArrays v1.2.11
⌅ [1a297f60] FillArrays v0.8.14
[3dd14ad9] FixedPolynomials v0.4.0
[59287772] Formatting v0.4.2
[f6369f11] ForwardDiff v0.10.34
[069b7b12] FunctionWrappers v1.1.3
⌅ [6b9d7cbe] GeneralizedGenerated v0.2.8
[14197337] GenericLinearAlgebra v0.3.5
⌅ [f213a82b] HomotopyContinuation v1.4.4
[92d709cd] IrrationalConstants v0.1.1
⌅ [42fd0dbc] IterativeSolvers v0.8.5
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.4.1
[b14d175d] JuliaVariables v0.2.4
[b964fa9f] LaTeXStrings v1.3.0
⌃ [2ee39098] LabelledArrays v1.6.6
⌅ [23fbe1c1] Latexify v0.13.5
⌅ [5078a376] LazyArrays v0.16.16
⌅ [d7e5e226] LazyBandedMatrices v0.2.12
⌃ [1d6d02ad] LeftChildRightSiblingTrees v0.1.3
⌃ [2ab3a3ac] LogExpFunctions v0.3.0
⌅ [e6f89c97] LoggingExtras v0.4.9
[d8e11817] MLStyle v0.4.16
[1914dd2f] MacroTools v0.5.10
⌅ [a3b82374] MatrixFactorizations v0.5.2
[291d046c] MixedSubdivisions v1.1.2
⌅ [961ee093] ModelingToolkit v2.0.0
[46d2c3a1] MuladdMacro v0.2.4
⌅ [102ac46a] MultivariatePolynomials v0.3.18
⌅ [d8a4904e] MutableArithmetics v0.2.22
⌅ [872c559c] NNlib v0.7.11
⌅ [77ba4419] NaNMath v0.3.7
[71a1bf82] NameResolution v0.1.5
[bac558e1] OrderedCollections v1.4.1
[d96e819e] Parameters v0.12.3
[e409e4f3] PoissonRandom v0.4.3
[f27b6e38] Polynomials v3.2.4
[21216c6a] Preferences v1.3.0
[8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v0.9.1
[33c8b6b6] ProgressLogging v0.1.4
[92933f4c] ProgressMeter v1.7.2
[01f381cc] ProjectiveVectors v1.1.3
[be4d8f0f] Quadmath v0.5.6
[e6cf234a] RandomNumbers v1.5.3
[3cdcf5f2] RecipesBase v1.3.3
⌃ [731186ca] RecursiveArrayTools v2.11.4
⌅ [f2c3362d] RecursiveFactorization v0.1.0
⌅ [189a3867] Reexport v0.2.0
[ae029012] Requires v1.3.0
⌅ [f2b01f46] Roots v1.4.1
[1bc83da4] SafeTestsets v0.0.1
⌅ [efcf1570] Setfield v0.8.2
[66db9d55] SnoopPrecompile v1.0.3
⌅ [276daf66] SpecialFunctions v0.8.0
⌅ [90137ffa] StaticArrays v0.12.5
[1e83bf80] StaticArraysCore v1.4.0
[62e018b1] StaticPolynomials v1.3.6
⌃ [c3572dad] Sundials v4.2.6
[123dc426] SymEngine v0.8.7
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.10.0
[5d786b92] TerminalLoggers v0.1.6
[a2a6695c] TreeViews v0.3.0
[30578b45] URIParser v0.4.1
[3a884ed6] UnPack v1.0.2
⌃ [1986cc42] Unitful v1.12.2
[700de1a5] ZygoteRules v0.2.2
[2ce0c516] MPC_jll v1.2.1+0
[fb77eaff] Sundials_jll v5.2.1+0
⌅ [3428059b] SymEngine_jll v0.8.1+0
[0dad84c5] ArgTools v1.1.1 @stdlib/ArgTools
[56f22d72] Artifacts @stdlib/Artifacts
[2a0f44e3] Base64 @stdlib/Base64
[ade2ca70] Dates @stdlib/Dates
[8bb1440f] DelimitedFiles @stdlib/DelimitedFiles
[8ba89e20] Distributed @stdlib/Distributed
[f43a241f] Downloads v1.6.0 @stdlib/Downloads
[7b1f6079] FileWatching @stdlib/FileWatching
[9fa8497b] Future @stdlib/Future
[b77e0a4c] InteractiveUtils @stdlib/InteractiveUtils
[b27032c2] LibCURL v0.6.3 @stdlib/LibCURL
[76f85450] LibGit2 @stdlib/LibGit2
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[d6f4376e] Markdown @stdlib/Markdown
[a63ad114] Mmap @stdlib/Mmap
[ca575930] NetworkOptions v1.2.0 @stdlib/NetworkOptions
[44cfe95a] Pkg v1.8.0 @stdlib/Pkg
[de0858da] Printf @stdlib/Printf
[3fa0cd96] REPL @stdlib/REPL
[9a3f8284] Random @stdlib/Random
[ea8e919c] SHA v0.7.0 @stdlib/SHA
[9e88b42a] Serialization @stdlib/Serialization
[1a1011a3] SharedArrays @stdlib/SharedArrays
[6462fe0b] Sockets @stdlib/Sockets
[2f01184e] SparseArrays @stdlib/SparseArrays
[10745b16] Statistics @stdlib/Statistics
[4607b0f0] SuiteSparse @stdlib/SuiteSparse
[fa267f1f] TOML v1.0.0 @stdlib/TOML
[a4e569a6] Tar v1.10.1 @stdlib/Tar
[8dfed614] Test @stdlib/Test
[cf7118a7] UUIDs @stdlib/UUIDs
[4ec0a83e] Unicode @stdlib/Unicode
[e66e0078] CompilerSupportLibraries_jll v1.0.1+0 @stdlib/CompilerSupportLibraries_jll
[781609d7] GMP_jll v6.2.1+2 @stdlib/GMP_jll
[deac9b47] LibCURL_jll v7.84.0+0 @stdlib/LibCURL_jll
[29816b5a] LibSSH2_jll v1.10.2+0 @stdlib/LibSSH2_jll
[3a97d323] MPFR_jll v4.1.1+1 @stdlib/MPFR_jll
[c8ffd9c3] MbedTLS_jll v2.28.0+0 @stdlib/MbedTLS_jll
[14a3606d] MozillaCACerts_jll v2022.2.1 @stdlib/MozillaCACerts_jll
[4536629a] OpenBLAS_jll v0.3.20+0 @stdlib/OpenBLAS_jll
[bea87d4a] SuiteSparse_jll v5.10.1+0 @stdlib/SuiteSparse_jll
[83775a58] Zlib_jll v1.2.12+3 @stdlib/Zlib_jll
[8e850b90] libblastrampoline_jll v5.1.1+0 @stdlib/libblastrampoline_jll
[8e850ede] nghttp2_jll v1.48.0+0 @stdlib/nghttp2_jll
[3f19e933] p7zip_jll v17.4.0+0 @stdlib/p7zip_jll
Info Packages marked with ⌃ and ⌅ have new versions available, but those with ⌅ are restricted by compatibility constraints from upgrading.
Testing Running tests...
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
T=0.4, Y=[0.9899652943580929, 3.470564190666435e-5, 0.01]
roots=Int32[0, 1]
T=0.4, Y=[0.9851640906722351, 3.386241699325715e-5, 0.014802046910771114]
T=4.0, Y=[0.905509670307843, 2.2403378846050117e-5, 0.09446792631331014]
T=40.0, Y=[0.7158015797469233, 9.185043328931088e-6, 0.28418923520974726]
T=400.0, Y=[0.450520872333455, 3.2228257877077353e-6, 0.5494759048407565]
T=4000.0, Y=[0.18322169164077126, 8.943516144954548e-7, 0.8167774140076135]
T=40000.0, Y=[0.03898091132304715, 1.6216688934655267e-7, 0.9610189265100634]
T=400000.0, Y=[0.004936971391576565, 1.9844502466172285e-8, 0.9950630087639206]
T=4.0e6, Y=[0.000517010320204611, 2.0690977989759934e-9, 0.9994829876106978]
T=4.0e7, Y=[9.999999999999992e-5, 4.00039528747344e-10, 0.9998999995999602]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204926760391501e-5, 2.0820776359257418e-10, 0.9999479505241882]
T=4.0e8, Y=[5.1849463049478235e-6, 2.0739891508302815e-11, 0.9999948150329551]
T=4.0e9, Y=[5.246211769412839e-7, 2.0984858346733178e-12, 0.9999994753767246]
T=4.0e10, Y=[6.043455470531721e-8, 2.41738235380483e-13, 0.9999999395652039]
Test Summary: | Time
CVODE | None 10.7s
T=0.4, Y=[0.9899652943718806, 3.4705628119662186e-5, 0.010000000000000002]
roots=Int32[0, 1]
T=0.4, Y=[0.9851707623122912, 3.386371656828505e-5, 0.01479537397114059]
T=4.0, Y=[0.905504728443, 2.24030741323827e-5, 0.09447286848286832]
T=40.0, Y=[0.7158418984108803, 9.18611950214165e-6, 0.28414891546961757]
T=400.0, Y=[0.45053789128414773, 3.2231511100131788e-6, 0.5494588855647428]
T=4000.0, Y=[0.18319969949401854, 8.942143972152571e-7, 0.8167994062915845]
T=40000.0, Y=[0.03898368270418011, 1.6217829385405389e-7, 0.961016155117526]
T=400000.0, Y=[0.004938675705664536, 1.9851554310243408e-8, 0.9950613044427804]
T=4.0e6, Y=[0.0005168882453198716, 2.0686115064850063e-9, 0.9994831096860654]
T=4.0e7, Y=[9.999999999999961e-5, 4.000395220229231e-10, 0.9998999995999603]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204772673773428e-5, 2.082016191813889e-10, 0.9999479520650584]
T=4.0e8, Y=[5.205357160257339e-6, 2.0821535763759906e-11, 0.9999947946220188]
T=4.0e9, Y=[5.190800207426813e-7, 2.0763211473603463e-12, 0.9999994809179029]
T=4.0e10, Y=[5.1177736621238506e-8, 2.0471095704096025e-13, 0.9999999488220589]
Test Summary: | Time
IDA | None 10.0s
T=0.4, Y=[0.9851721138377025, 3.386406120817996e-5, 0.014794022101089307]
T=4.0, Y=[0.9055186785328794, 2.2404781805334787e-5, 0.09445891668531428]
T=40.0, Y=[0.715827068739702, 9.185512472082487e-6, 0.28416374574782616]
T=400.0, Y=[0.45051866843284366, 3.222907159344263e-6, 0.5494781086599967]
T=4000.0, Y=[0.18320225667994575, 8.94230214472978e-7, 0.8167968490898406]
T=40000.0, Y=[0.0389833781311506, 1.6217923841619925e-7, 0.9610164596896126]
T=400000.0, Y=[0.004938279580768946, 1.9855397711492742e-8, 0.9950617005638343]
T=4.0e6, Y=[0.0005168084668713924, 2.0682376749441686e-9, 0.9994831894648913]
T=4.0e7, Y=[5.2030933038364054e-5, 2.081716637615316e-10, 0.9999479688587902]
T=4.0e8, Y=[5.207732919999157e-6, 2.0835595834773645e-11, 0.9999947922462442]
T=4.0e9, Y=[5.208288315326947e-7, 2.0901392725744845e-12, 0.9999994791690782]
T=4.0e10, Y=[5.208387679883955e-8, 2.076755627255998e-13, 0.9999999479159154]
Test Summary: | Pass Total Time
ARK | 23 23 7.2s
Solution: [0.7861540663366059, 0.6180344478352109]
Residual: [4.794728554635697e-6, -3.7681823696900096e-6]
Test Summary: | Pass Total Time
Kinsol | 2 2 4.5s
Test Summary: | Pass Total Time
Handle Tests | 13 13 2.6s
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
CVODE: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
Got exception outside of a @test
LoadError: ArgumentError: internal representation does not support non-call Expr
Stacktrace:
[1] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:3
[2] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[3] _broadcast_getindex
@ ./broadcast.jl:653 [inlined]
[4] getindex
@ ./broadcast.jl:597 [inlined]
[5] copy
@ ./broadcast.jl:899 [inlined]
[6] materialize
@ ./broadcast.jl:860 [inlined]
[7] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:6
[8] derivative(#unused#::typeof(^), args::Tuple{ModelingToolkit.Operation, ModelingToolkit.Constant}, #unused#::Val{2})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:106
[9] derivative(O::ModelingToolkit.Operation, idx::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:94
[10] (::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential})(i::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:51
[11] _mapreduce(f::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential}, op::typeof(Base.add_sum), #unused#::IndexLinear, A::UnitRange{Int64})
@ Base ./reduce.jl:435
[12] _mapreduce_dim(f::Function, op::Function, #unused#::Base._InitialValue, A::UnitRange{Int64}, #unused#::Colon)
@ Base ./reducedim.jl:365
[13] #mapreduce#765
@ ./reducedim.jl:357 [inlined]
[14] mapreduce
@ ./reducedim.jl:357 [inlined]
[15] #_sum#775
@ ./reducedim.jl:999 [inlined]
[16] _sum
@ ./reducedim.jl:999 [inlined]
[17] #sum#773
@ ./reducedim.jl:995 [inlined]
[18] sum(f::Function, a::UnitRange{Int64})
@ Base ./reducedim.jl:995
[19] expand_derivatives(O::ModelingToolkit.Operation)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:50
--- the last 10 lines are repeated 4 more times ---
[60] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[61] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[62] getindex
@ ./broadcast.jl:597 [inlined]
[63] copy
@ ./broadcast.jl:899 [inlined]
[64] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{2}, Nothing, typeof(ModelingToolkit.expand_derivatives), Tuple{Matrix{ModelingToolkit.Expression}}})
@ Base.Broadcast ./broadcast.jl:860
[65] calculate_jacobian(sys::ModelingToolkit.ODESystem)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:18
[66] generate_jacobian(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}, expression::Type; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:43
[67] generate_jacobian
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:42 [inlined]
[68] (ODEFunction{true})(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}; version::Nothing, tgrad::Bool, jac::Bool, Wfact::Bool)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:139
[69] #ODEFunction#79
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:111 [inlined]
[70] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
[71] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[72] include(x::String)
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3
[73] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
[74] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[75] include
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3 [inlined]
[76] importodeproblems()
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:5
[77] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3
[78] include(fname::String)
@ Base.MainInclude ./client.jl:476
[79] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32 [inlined]
[80] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
--- the last 2 lines are repeated 1 more time ---
[83] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[84] include(fname::String)
@ Base.MainInclude ./client.jl:476
[85] top-level scope
@ none:6
[86] eval
@ ./boot.jl:368 [inlined]
[87] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3

[ARKode::ARKStep ERROR] ARKStepSetMaxNonlinIters
No SUNNonlinearSolver object is present

[ Info: Multiple abstol
[ Info: Band solver
[ Info: GMRES solver
[ Info: TFQMR solver

[IDAS ERROR] IDASolve
At t = 864.652 and h = 0.000120543, the corrector convergence failed repeatedly or with |h| = hmin.

[ Info: FGMRES solver
[ Info: PCG solver
[ Info: GMRES for identity preconditioner
[ Info: GMRES with pset
[ Info: IDA with saveat
[ Info: IDA with saveat everystep
[ Info: IDA with tstops
With consistent initial conditions:
With inconsistent initial conditions:
Jacobians: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:35
Got exception outside of a @test
LoadError: ArgumentError: Illegal buffers for SparseMatrixCSC construction 2 [1, 1, 1] [0, 0, 0, 0] [0.0, 0.0, 0.0, 0.0]
Stacktrace:
[1] SparseMatrixCSC
@ /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:29 [inlined]
[2] SparseMatrixCSC(m::Int64, n::Int64, colptr::Vector{Int64}, rowval::Vector{Int64}, nzval::Vector{Float64})
@ SparseArrays /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:44
[3] convert(#unused#::Type{SparseMatrixCSC}, J::Ptr{Sundials._generic_SUNMatrix})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/types_and_consts_additions.jl:50
[4] cvodejac(t::Float64, u::Ptr{Sundials._generic_N_Vector}, du::Ptr{Sundials._generic_N_Vector}, _J::Ptr{Sundials._generic_SUNMatrix}, funjac::Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, tmp1::Ptr{Sundials._generic_N_Vector}, tmp2::Ptr{Sundials._generic_N_Vector}, tmp3::Ptr{Sundials._generic_N_Vector})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/function_types.jl:66
[5] CVode
@ ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:166 [inlined]
[6] CVode(cvode_mem::Sundials.Handle{Sundials.CVODEMem}, tout::Float64, yout::Vector{Float64}, tret::Vector{Float64}, itask::Int32)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:171
[7] solver_step(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing}, tstop::Float64)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1099
[8] solve!(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1164
[9] __solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, alg::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, timeseries::Vector{Any}, ts::Vector{Any}, ks::Vector{Any}, recompile::Type{Val{true}}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:12
[10] __solve (repeats 5 times)
@ ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:3 [inlined]
[11] solve_call(_prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}; merge_callbacks::Bool, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:92
[12] solve_call
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:64 [inlined]
[13] #solve_up#467
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:114 [inlined]
[14] solve_up
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:105 [inlined]
[15] #solve#466
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:102 [inlined]
[16] solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:98
[17] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[18] include(fname::String)
@ Base.MainInclude ./client.jl:476
[19] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[20] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[21] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[22] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[23] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[24] include(fname::String)
@ Base.MainInclude ./client.jl:476
[25] top-level scope
@ none:6
[26] eval
@ ./boot.jl:368 [inlined]
[27] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
[28] _start()
@ Base ./client.jl:522
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[ Info: 0.044464449958102746
[ Info: 0.1199702927305579
[ Info: 0.19547613550301304
[ Info: 0.2709819782754682
[ Info: 0.34648782104792336
[ Info: 1.0
Test error handling

[CVODES WARNING] CVode
Internal t = 0 and h = 0 are such that t + h = t on the next step. The solver will continue anyway.

[CVODES ERROR] CVode
At t = 0 and h = 0, the corrector convergence test failed repeatedly or with |h| = hmin.

[IDAS ERROR] IDACalcIC
Newton/Linesearch algorithm failed to converge.

Test Summary: | Pass Error Total Time
Common Interface | 20 2 22 6m19.1s
CVODE | 1 1 2m52.1s
ARKODE | 4 4 41.1s
IDA | 7 7 1m39.3s
Jacobians | 1 1 2 8.4s
Callbacks | 6 6 21.6s
Iterator | None 2.7s
Errors | 1 1 11.6s
Mass Matrix | 1 1 22.3s
ERROR: LoadError: Some tests did not pass: 20 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:31
ERROR: Package Sundials errored during testing

(@v1.8) pkg> up
Updating registry at ~/.julia/registries/General.toml
Updating git-repo https://github.com/JuliaGeo/NetCDF.jl.git
Updating git-repo https://github.com/JuliaMath/IntervalSets.jl.git
Installed Parsers ───── v2.5.6
Installed OpenSSL_jll ─ v1.1.20+0
Installed Unitful ───── v1.12.3
Downloaded artifact: OpenSSL
Updating ~/.julia/environments/v1.8/Project.toml
[1986cc42] ↑ Unitful v1.12.2 ⇒ v1.12.3
Updating ~/.julia/environments/v1.8/Manifest.toml
[69de0a69] ↑ Parsers v2.5.5 ⇒ v2.5.6
[1986cc42] ↑ Unitful v1.12.2 ⇒ v1.12.3
[458c3c95] ↑ OpenSSL_jll v1.1.19+0 ⇒ v1.1.20+0
Precompiling project...
✗ MathOptInterface
✗ DifferentialEquations
41 dependencies successfully precompiled in 566 seconds. 338 already precompiled. 1 skipped during auto due to previous errors.
2 dependencies errored. To see a full report either run import Pkg; Pkg.precompile() or load the packages

(@v1.8) pkg> build Compat@4

(@v1.8) pkg> test Compat@4
Testing Compat
Status /tmp/jl_yNeCOr/Project.toml
⌃ [34da2185] Compat v2.2.1
[2a0f44e3] Base64 @stdlib/Base64
[ade2ca70] Dates @stdlib/Dates
[8bb1440f] DelimitedFiles @stdlib/DelimitedFiles
[8ba89e20] Distributed @stdlib/Distributed
[b77e0a4c] InteractiveUtils @stdlib/InteractiveUtils
[76f85450] LibGit2 @stdlib/LibGit2
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[d6f4376e] Markdown @stdlib/Markdown
[a63ad114] Mmap @stdlib/Mmap
[44cfe95a] Pkg v1.8.0 @stdlib/Pkg
[de0858da] Printf @stdlib/Printf
[3fa0cd96] REPL @stdlib/REPL
[9a3f8284] Random @stdlib/Random
[9e88b42a] Serialization @stdlib/Serialization
[1a1011a3] SharedArrays @stdlib/SharedArrays
[6462fe0b] Sockets @stdlib/Sockets
[2f01184e] SparseArrays @stdlib/SparseArrays
[10745b16] Statistics @stdlib/Statistics
[8dfed614] Test @stdlib/Test
[cf7118a7] UUIDs @stdlib/UUIDs
[4ec0a83e] Unicode @stdlib/Unicode
Status /tmp/jl_yNeCOr/Manifest.toml
⌃ [34da2185] Compat v2.2.1
[0dad84c5] ArgTools v1.1.1 @stdlib/ArgTools
[56f22d72] Artifacts @stdlib/Artifacts
[2a0f44e3] Base64 @stdlib/Base64
[ade2ca70] Dates @stdlib/Dates
[8bb1440f] DelimitedFiles @stdlib/DelimitedFiles
[8ba89e20] Distributed @stdlib/Distributed
[f43a241f] Downloads v1.6.0 @stdlib/Downloads
[7b1f6079] FileWatching @stdlib/FileWatching
[b77e0a4c] InteractiveUtils @stdlib/InteractiveUtils
[b27032c2] LibCURL v0.6.3 @stdlib/LibCURL
[76f85450] LibGit2 @stdlib/LibGit2
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[d6f4376e] Markdown @stdlib/Markdown
[a63ad114] Mmap @stdlib/Mmap
[ca575930] NetworkOptions v1.2.0 @stdlib/NetworkOptions
[44cfe95a] Pkg v1.8.0 @stdlib/Pkg
[de0858da] Printf @stdlib/Printf
[3fa0cd96] REPL @stdlib/REPL
[9a3f8284] Random @stdlib/Random
[ea8e919c] SHA v0.7.0 @stdlib/SHA
[9e88b42a] Serialization @stdlib/Serialization
[1a1011a3] SharedArrays @stdlib/SharedArrays
[6462fe0b] Sockets @stdlib/Sockets
[2f01184e] SparseArrays @stdlib/SparseArrays
[10745b16] Statistics @stdlib/Statistics
[fa267f1f] TOML v1.0.0 @stdlib/TOML
[a4e569a6] Tar v1.10.1 @stdlib/Tar
[8dfed614] Test @stdlib/Test
[cf7118a7] UUIDs @stdlib/UUIDs
[4ec0a83e] Unicode @stdlib/Unicode
[e66e0078] CompilerSupportLibraries_jll v1.0.1+0 @stdlib/CompilerSupportLibraries_jll
[deac9b47] LibCURL_jll v7.84.0+0 @stdlib/LibCURL_jll
[29816b5a] LibSSH2_jll v1.10.2+0 @stdlib/LibSSH2_jll
[c8ffd9c3] MbedTLS_jll v2.28.0+0 @stdlib/MbedTLS_jll
[14a3606d] MozillaCACerts_jll v2022.2.1 @stdlib/MozillaCACerts_jll
[4536629a] OpenBLAS_jll v0.3.20+0 @stdlib/OpenBLAS_jll
[83775a58] Zlib_jll v1.2.12+3 @stdlib/Zlib_jll
[8e850b90] libblastrampoline_jll v5.1.1+0 @stdlib/libblastrampoline_jll
[8e850ede] nghttp2_jll v1.48.0+0 @stdlib/nghttp2_jll
[3f19e933] p7zip_jll v17.4.0+0 @stdlib/p7zip_jll
Info Packages marked with ⌃ have new versions available and may be upgradable.
Testing Running tests...
Skipping Base.active_repl
Skipping Base.active_repl_backend
Test Summary: | Pass Total Time
row/column/slice iterators | 6 6 1.4s
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = getindex at range.jl:974 [inlined]
└ @ Core ./range.jl:974
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1092 [inlined]
└ @ Core ./broadcast.jl:1092
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = getindex at range.jl:974 [inlined]
└ @ Core ./range.jl:974
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: qr(A::AbstractMatrix, ::Val{false}; kwargs...) is deprecated, use qr(A, NoPivot(); kwargs...) instead.
│ caller = top-level scope at runtests.jl:1216
└ @ Core ~/.julia/packages/Compat/YUYtz/test/runtests.jl:1216
┌ Warning: qr(A::AbstractMatrix, ::Val{true}; kwargs...) is deprecated, use qr(A, ColumnNorm(); kwargs...) instead.
│ caller = top-level scope at runtests.jl:1219
└ @ Core ~/.julia/packages/Compat/YUYtz/test/runtests.jl:1219
Test Summary: | Pass Total Time
only | 24 24 0.5s
Test Summary: | Pass Total Time
mod with ranges | 90 90 0.0s
Testing Compat tests passed

(@v1.8) pkg> test Sundials
Testing Sundials
Status /tmp/jl_AhGg3w/Project.toml
[fa961155] CEnum v0.4.2
⌅ [864edb3b] DataStructures v0.17.20
⌃ [2b5f629d] DiffEqBase v6.44.3
⌃ [9fdde737] DiffEqOperators v4.12.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[f6369f11] ForwardDiff v0.10.34
⌅ [189a3867] Reexport v0.2.0
⌃ [c3572dad] Sundials v4.2.6
[fb77eaff] Sundials_jll v5.2.1+0
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[2f01184e] SparseArrays @stdlib/SparseArrays
[8dfed614] Test @stdlib/Test
Status /tmp/jl_AhGg3w/Manifest.toml
⌅ [1520ce14] AbstractTrees v0.3.4
[79e6a3ab] Adapt v3.5.0
⌅ [4fba245c] ArrayInterface v2.14.17
⌅ [4c555306] ArrayLayouts v0.3.8
⌅ [aae01518] BandedMatrices v0.15.15
[9e28174c] BinDeps v1.0.2
[b99e7846] BinaryProvider v0.5.10
⌅ [8e7c35d0] BlockArrays v0.12.11
⌅ [ffab5731] BlockBandedMatrices v0.8.11
[fa961155] CEnum v0.4.2
[a603d957] CanonicalTraits v0.2.4
⌅ [d360d2e6] ChainRulesCore v0.9.45
[38540f10] CommonSolve v0.2.3
[bbf7d656] CommonSubexpressions v0.3.0
⌅ [34da2185] Compat v2.2.1
[88cd18e8] ConsoleProgressMonitor v0.1.2
[187b0558] ConstructionBase v1.4.1
[a8cc5b0e] Crayons v4.1.1
[9a962f9c] DataAPI v1.14.0
⌅ [864edb3b] DataStructures v0.17.20
[e2d170a0] DataValueInterfaces v1.0.0
⌃ [2b5f629d] DiffEqBase v6.44.3
[eb300fae] DiffEqBiological v4.3.0
⌅ [c894b116] DiffEqJump v6.10.0
⌃ [9fdde737] DiffEqOperators v4.12.0
⌃ [a077e3f3] DiffEqProblemLibrary v4.8.1
[163ba53b] DiffResults v1.1.0
⌃ [b552c78f] DiffRules v1.5.0
⌅ [ffbed154] DocStringExtensions v0.8.6
[497a8b3b] DoubleFloats v1.2.3
⌅ [7c1d4256] DynamicPolynomials v0.3.21
[fdbdab4c] ElasticArrays v1.2.11
⌅ [1a297f60] FillArrays v0.8.14
[3dd14ad9] FixedPolynomials v0.4.0
[59287772] Formatting v0.4.2
[f6369f11] ForwardDiff v0.10.34
[069b7b12] FunctionWrappers v1.1.3
⌅ [6b9d7cbe] GeneralizedGenerated v0.2.8
[14197337] GenericLinearAlgebra v0.3.5
⌅ [f213a82b] HomotopyContinuation v1.4.4
[92d709cd] IrrationalConstants v0.1.1
⌅ [42fd0dbc] IterativeSolvers v0.8.5
[82899510] IteratorInterfaceExtensions v1.0.0
[692b3bcd] JLLWrappers v1.4.1
[b14d175d] JuliaVariables v0.2.4
[b964fa9f] LaTeXStrings v1.3.0
⌃ [2ee39098] LabelledArrays v1.6.6
⌅ [23fbe1c1] Latexify v0.13.5
⌅ [5078a376] LazyArrays v0.16.16
⌅ [d7e5e226] LazyBandedMatrices v0.2.12
⌃ [1d6d02ad] LeftChildRightSiblingTrees v0.1.3
⌃ [2ab3a3ac] LogExpFunctions v0.3.0
⌅ [e6f89c97] LoggingExtras v0.4.9
[d8e11817] MLStyle v0.4.16
[1914dd2f] MacroTools v0.5.10
⌅ [a3b82374] MatrixFactorizations v0.5.2
[291d046c] MixedSubdivisions v1.1.2
⌅ [961ee093] ModelingToolkit v2.0.0
[46d2c3a1] MuladdMacro v0.2.4
⌅ [102ac46a] MultivariatePolynomials v0.3.18
⌅ [d8a4904e] MutableArithmetics v0.2.22
⌅ [872c559c] NNlib v0.7.11
⌅ [77ba4419] NaNMath v0.3.7
[71a1bf82] NameResolution v0.1.5
[bac558e1] OrderedCollections v1.4.1
[d96e819e] Parameters v0.12.3
[e409e4f3] PoissonRandom v0.4.3
[f27b6e38] Polynomials v3.2.4
[21216c6a] Preferences v1.3.0
[8162dcfd] PrettyPrint v0.2.0
⌅ [08abe8d2] PrettyTables v0.9.1
[33c8b6b6] ProgressLogging v0.1.4
[92933f4c] ProgressMeter v1.7.2
[01f381cc] ProjectiveVectors v1.1.3
[be4d8f0f] Quadmath v0.5.6
[e6cf234a] RandomNumbers v1.5.3
[3cdcf5f2] RecipesBase v1.3.3
⌃ [731186ca] RecursiveArrayTools v2.11.4
⌅ [f2c3362d] RecursiveFactorization v0.1.0
⌅ [189a3867] Reexport v0.2.0
[ae029012] Requires v1.3.0
⌅ [f2b01f46] Roots v1.4.1
[1bc83da4] SafeTestsets v0.0.1
⌅ [efcf1570] Setfield v0.8.2
[66db9d55] SnoopPrecompile v1.0.3
⌅ [276daf66] SpecialFunctions v0.8.0
⌅ [90137ffa] StaticArrays v0.12.5
[1e83bf80] StaticArraysCore v1.4.0
[62e018b1] StaticPolynomials v1.3.6
⌃ [c3572dad] Sundials v4.2.6
[123dc426] SymEngine v0.8.7
[3783bdb8] TableTraits v1.0.1
[bd369af6] Tables v1.10.0
[5d786b92] TerminalLoggers v0.1.6
[a2a6695c] TreeViews v0.3.0
[30578b45] URIParser v0.4.1
[3a884ed6] UnPack v1.0.2
[1986cc42] Unitful v1.12.3
[700de1a5] ZygoteRules v0.2.2
[2ce0c516] MPC_jll v1.2.1+0
[fb77eaff] Sundials_jll v5.2.1+0
⌅ [3428059b] SymEngine_jll v0.8.1+0
[0dad84c5] ArgTools v1.1.1 @stdlib/ArgTools
[56f22d72] Artifacts @stdlib/Artifacts
[2a0f44e3] Base64 @stdlib/Base64
[ade2ca70] Dates @stdlib/Dates
[8bb1440f] DelimitedFiles @stdlib/DelimitedFiles
[8ba89e20] Distributed @stdlib/Distributed
[f43a241f] Downloads v1.6.0 @stdlib/Downloads
[7b1f6079] FileWatching @stdlib/FileWatching
[9fa8497b] Future @stdlib/Future
[b77e0a4c] InteractiveUtils @stdlib/InteractiveUtils
[b27032c2] LibCURL v0.6.3 @stdlib/LibCURL
[76f85450] LibGit2 @stdlib/LibGit2
[8f399da3] Libdl @stdlib/Libdl
[37e2e46d] LinearAlgebra @stdlib/LinearAlgebra
[56ddb016] Logging @stdlib/Logging
[d6f4376e] Markdown @stdlib/Markdown
[a63ad114] Mmap @stdlib/Mmap
[ca575930] NetworkOptions v1.2.0 @stdlib/NetworkOptions
[44cfe95a] Pkg v1.8.0 @stdlib/Pkg
[de0858da] Printf @stdlib/Printf
[3fa0cd96] REPL @stdlib/REPL
[9a3f8284] Random @stdlib/Random
[ea8e919c] SHA v0.7.0 @stdlib/SHA
[9e88b42a] Serialization @stdlib/Serialization
[1a1011a3] SharedArrays @stdlib/SharedArrays
[6462fe0b] Sockets @stdlib/Sockets
[2f01184e] SparseArrays @stdlib/SparseArrays
[10745b16] Statistics @stdlib/Statistics
[4607b0f0] SuiteSparse @stdlib/SuiteSparse
[fa267f1f] TOML v1.0.0 @stdlib/TOML
[a4e569a6] Tar v1.10.1 @stdlib/Tar
[8dfed614] Test @stdlib/Test
[cf7118a7] UUIDs @stdlib/UUIDs
[4ec0a83e] Unicode @stdlib/Unicode
[e66e0078] CompilerSupportLibraries_jll v1.0.1+0 @stdlib/CompilerSupportLibraries_jll
[781609d7] GMP_jll v6.2.1+2 @stdlib/GMP_jll
[deac9b47] LibCURL_jll v7.84.0+0 @stdlib/LibCURL_jll
[29816b5a] LibSSH2_jll v1.10.2+0 @stdlib/LibSSH2_jll
[3a97d323] MPFR_jll v4.1.1+1 @stdlib/MPFR_jll
[c8ffd9c3] MbedTLS_jll v2.28.0+0 @stdlib/MbedTLS_jll
[14a3606d] MozillaCACerts_jll v2022.2.1 @stdlib/MozillaCACerts_jll
[4536629a] OpenBLAS_jll v0.3.20+0 @stdlib/OpenBLAS_jll
[bea87d4a] SuiteSparse_jll v5.10.1+0 @stdlib/SuiteSparse_jll
[83775a58] Zlib_jll v1.2.12+3 @stdlib/Zlib_jll
[8e850b90] libblastrampoline_jll v5.1.1+0 @stdlib/libblastrampoline_jll
[8e850ede] nghttp2_jll v1.48.0+0 @stdlib/nghttp2_jll
[3f19e933] p7zip_jll v17.4.0+0 @stdlib/p7zip_jll
Info Packages marked with ⌃ and ⌅ have new versions available, but those with ⌅ are restricted by compatibility constraints from upgrading.
Testing Running tests...
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
T=0.4, Y=[0.9899652943580929, 3.470564190666435e-5, 0.01]
roots=Int32[0, 1]
T=0.4, Y=[0.9851640906722351, 3.386241699325715e-5, 0.014802046910771114]
T=4.0, Y=[0.905509670307843, 2.2403378846050117e-5, 0.09446792631331014]
T=40.0, Y=[0.7158015797469233, 9.185043328931088e-6, 0.28418923520974726]
T=400.0, Y=[0.450520872333455, 3.2228257877077353e-6, 0.5494759048407565]
T=4000.0, Y=[0.18322169164077126, 8.943516144954548e-7, 0.8167774140076135]
T=40000.0, Y=[0.03898091132304715, 1.6216688934655267e-7, 0.9610189265100634]
T=400000.0, Y=[0.004936971391576565, 1.9844502466172285e-8, 0.9950630087639206]
T=4.0e6, Y=[0.000517010320204611, 2.0690977989759934e-9, 0.9994829876106978]
T=4.0e7, Y=[9.999999999999992e-5, 4.00039528747344e-10, 0.9998999995999602]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204926760391501e-5, 2.0820776359257418e-10, 0.9999479505241882]
T=4.0e8, Y=[5.1849463049478235e-6, 2.0739891508302815e-11, 0.9999948150329551]
T=4.0e9, Y=[5.246211769412839e-7, 2.0984858346733178e-12, 0.9999994753767246]
T=4.0e10, Y=[6.043455470531721e-8, 2.41738235380483e-13, 0.9999999395652039]
Test Summary: |Time
CVODE | None 3.8s
T=0.4, Y=[0.9899652943718806, 3.4705628119662186e-5, 0.010000000000000002]
roots=Int32[0, 1]
T=0.4, Y=[0.9851707623122912, 3.386371656828505e-5, 0.01479537397114059]
T=4.0, Y=[0.905504728443, 2.24030741323827e-5, 0.09447286848286832]
T=40.0, Y=[0.7158418984108803, 9.18611950214165e-6, 0.28414891546961757]
T=400.0, Y=[0.45053789128414773, 3.2231511100131788e-6, 0.5494588855647428]
T=4000.0, Y=[0.18319969949401854, 8.942143972152571e-7, 0.8167994062915845]
T=40000.0, Y=[0.03898368270418011, 1.6217829385405389e-7, 0.961016155117526]
T=400000.0, Y=[0.004938675705664536, 1.9851554310243408e-8, 0.9950613044427804]
T=4.0e6, Y=[0.0005168882453198716, 2.0686115064850063e-9, 0.9994831096860654]
T=4.0e7, Y=[9.999999999999961e-5, 4.000395220229231e-10, 0.9998999995999603]
roots=Int32[-1, 0]
T=4.0e7, Y=[5.204772673773428e-5, 2.082016191813889e-10, 0.9999479520650584]
T=4.0e8, Y=[5.205357160257339e-6, 2.0821535763759906e-11, 0.9999947946220188]
T=4.0e9, Y=[5.190800207426813e-7, 2.0763211473603463e-12, 0.9999994809179029]
T=4.0e10, Y=[5.1177736621238506e-8, 2.0471095704096025e-13, 0.9999999488220589]
Test Summary: |Time
IDA | None 1.9s
T=0.4, Y=[0.9851721138377025, 3.386406120817996e-5, 0.014794022101089307]
T=4.0, Y=[0.9055186785328794, 2.2404781805334787e-5, 0.09445891668531428]
T=40.0, Y=[0.715827068739702, 9.185512472082487e-6, 0.28416374574782616]
T=400.0, Y=[0.45051866843284366, 3.222907159344263e-6, 0.5494781086599967]
T=4000.0, Y=[0.18320225667994575, 8.94230214472978e-7, 0.8167968490898406]
T=40000.0, Y=[0.0389833781311506, 1.6217923841619925e-7, 0.9610164596896126]
T=400000.0, Y=[0.004938279580768946, 1.9855397711492742e-8, 0.9950617005638343]
T=4.0e6, Y=[0.0005168084668713924, 2.0682376749441686e-9, 0.9994831894648913]
T=4.0e7, Y=[5.2030933038364054e-5, 2.081716637615316e-10, 0.9999479688587902]
T=4.0e8, Y=[5.207732919999157e-6, 2.0835595834773645e-11, 0.9999947922462442]
T=4.0e9, Y=[5.208288315326947e-7, 2.0901392725744845e-12, 0.9999994791690782]
T=4.0e10, Y=[5.208387679883955e-8, 2.076755627255998e-13, 0.9999999479159154]
Test Summary: | Pass Total Time
ARK | 23 23 1.4s
Solution: [0.7861540663366059, 0.6180344478352109]
Residual: [4.794728554635697e-6, -3.7681823696900096e-6]
Test Summary: | Pass Total Time
Kinsol | 2 2 0.8s
Test Summary: | Pass Total Time
Handle Tests | 13 13 0.5s
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
┌ Warning: range(start, stop) (with neither length nor step given) is deprecated, use range(start, stop=stop) instead.
│ caller = broadcasted at broadcast.jl:1093 [inlined]
└ @ Core ./broadcast.jl:1093
CVODE: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
Got exception outside of a @test
LoadError: ArgumentError: internal representation does not support non-call Expr
Stacktrace:
[1] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:3
[2] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[3] _broadcast_getindex
@ ./broadcast.jl:653 [inlined]
[4] getindex
@ ./broadcast.jl:597 [inlined]
[5] copy
@ ./broadcast.jl:899 [inlined]
[6] materialize
@ ./broadcast.jl:860 [inlined]
[7] convert(#unused#::Type{ModelingToolkit.Expression}, ex::Expr)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/utils.jl:6
[8] derivative(#unused#::typeof(^), args::Tuple{ModelingToolkit.Operation, ModelingToolkit.Constant}, #unused#::Val{2})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:106
[9] derivative(O::ModelingToolkit.Operation, idx::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:94
[10] (::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential})(i::Int64)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:51
[11] _mapreduce(f::ModelingToolkit.var"#4#5"{ModelingToolkit.Operation, ModelingToolkit.Differential}, op::typeof(Base.add_sum), #unused#::IndexLinear, A::UnitRange{Int64})
@ Base ./reduce.jl:435
[12] _mapreduce_dim(f::Function, op::Function, #unused#::Base._InitialValue, A::UnitRange{Int64}, #unused#::Colon)
@ Base ./reducedim.jl:365
[13] #mapreduce#765
@ ./reducedim.jl:357 [inlined]
[14] mapreduce
@ ./reducedim.jl:357 [inlined]
[15] #_sum#775
@ ./reducedim.jl:999 [inlined]
[16] _sum
@ ./reducedim.jl:999 [inlined]
[17] #sum#773
@ ./reducedim.jl:995 [inlined]
[18] sum(f::Function, a::UnitRange{Int64})
@ Base ./reducedim.jl:995
[19] expand_derivatives(O::ModelingToolkit.Operation)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/differentials.jl:50
--- the last 10 lines are repeated 4 more times ---
[60] _broadcast_getindex_evalf
@ ./broadcast.jl:670 [inlined]
[61] _broadcast_getindex
@ ./broadcast.jl:643 [inlined]
[62] getindex
@ ./broadcast.jl:597 [inlined]
[63] copy
@ ./broadcast.jl:899 [inlined]
[64] materialize(bc::Base.Broadcast.Broadcasted{Base.Broadcast.DefaultArrayStyle{2}, Nothing, typeof(ModelingToolkit.expand_derivatives), Tuple{Matrix{ModelingToolkit.Expression}}})
@ Base.Broadcast ./broadcast.jl:860
[65] calculate_jacobian(sys::ModelingToolkit.ODESystem)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:18
[66] generate_jacobian(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}, expression::Type; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:43
[67] generate_jacobian
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:42 [inlined]
[68] (ODEFunction{true})(sys::ModelingToolkit.ODESystem, dvs::Vector{ModelingToolkit.Operation}, ps::Vector{ModelingToolkit.Operation}; version::Nothing, tgrad::Bool, jac::Bool, Wfact::Bool)
@ ModelingToolkit ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:139
[69] #ODEFunction#79
@ ~/.julia/packages/ModelingToolkit/N4mo2/src/systems/diffeqs/abstractodesystem.jl:111 [inlined]
[70] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
[71] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[72] include(x::String)
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3
[73] top-level scope
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
[74] include(mod::Module, _path::String)
@ Base ./Base.jl:419
[75] include
@ ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:3 [inlined]
[76] importodeproblems()
@ DiffEqProblemLibrary.ODEProblemLibrary ~/.julia/packages/DiffEqProblemLibrary/D95Qo/src/DiffEqProblemLibrary.jl:5
[77] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3
[78] include(fname::String)
@ Base.MainInclude ./client.jl:476
[79] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32 [inlined]
[80] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
--- the last 2 lines are repeated 1 more time ---
[83] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[84] include(fname::String)
@ Base.MainInclude ./client.jl:476
[85] top-level scope
@ none:6
[86] eval
@ ./boot.jl:368 [inlined]
[87] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_simple_nonlinear_prob.jl:58
in expression starting at /home/ian/.julia/packages/DiffEqProblemLibrary/D95Qo/src/ode/ode_premade_problems.jl:17
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/cvode.jl:3

[ARKode::ARKStep ERROR] ARKStepSetMaxNonlinIters
No SUNNonlinearSolver object is present

[ Info: Multiple abstol
[ Info: Band solver
[ Info: GMRES solver
[ Info: TFQMR solver

[IDAS ERROR] IDASolve
At t = 864.652 and h = 0.000120543, the corrector convergence failed repeatedly or with |h| = hmin.

[ Info: FGMRES solver
[ Info: PCG solver
[ Info: GMRES for identity preconditioner
[ Info: GMRES with pset
[ Info: IDA with saveat
[ Info: IDA with saveat everystep
[ Info: IDA with tstops
With consistent initial conditions:
With inconsistent initial conditions:
Jacobians: Error During Test at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:35
Got exception outside of a @test
LoadError: ArgumentError: Illegal buffers for SparseMatrixCSC construction 2 [1, 1, 1] [0, 0, 0, 0] [0.0, 0.0, 0.0, 0.0]
Stacktrace:
[1] SparseMatrixCSC
@ /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:29 [inlined]
[2] SparseMatrixCSC(m::Int64, n::Int64, colptr::Vector{Int64}, rowval::Vector{Int64}, nzval::Vector{Float64})
@ SparseArrays /snap/julia/74/share/julia/stdlib/v1.8/SparseArrays/src/sparsematrix.jl:44
[3] convert(#unused#::Type{SparseMatrixCSC}, J::Ptr{Sundials._generic_SUNMatrix})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/types_and_consts_additions.jl:50
[4] cvodejac(t::Float64, u::Ptr{Sundials._generic_N_Vector}, du::Ptr{Sundials._generic_N_Vector}, _J::Ptr{Sundials._generic_SUNMatrix}, funjac::Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, tmp1::Ptr{Sundials._generic_N_Vector}, tmp2::Ptr{Sundials._generic_N_Vector}, tmp3::Ptr{Sundials._generic_N_Vector})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/function_types.jl:66
[5] CVode
@ ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:166 [inlined]
[6] CVode(cvode_mem::Sundials.Handle{Sundials.CVODEMem}, tout::Float64, yout::Vector{Float64}, tret::Vector{Float64}, itask::Int32)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/API/cvodes.jl:171
[7] solver_step(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing}, tstop::Float64)
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1099
[8] solve!(integrator::Sundials.CVODEIntegrator{Vector{Float64}, DiffEqBase.NullParameters, Sundials.Handle{Sundials.CVODEMem}, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, DiffEqBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, DiffEqBase.DEStats}, CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Sundials.FunJac{ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, typeof(Lotka_jac), DiffEqBase.NullParameters, Nothing, SparseMatrixCSC{Float64, Int64}, Vector{Float64}, Nothing, Nothing, Nothing}, Ptr{Nothing}, Sundials.DEOptions{DataStructures.BinaryMinHeap{Float64}, DataStructures.BinaryMinHeap{Float64}, CallbackSet{Tuple{}, Tuple{}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Vector{Float64}, Tuple{Int64}, Vector{Float64}, Sundials.LinSolHandle{Sundials.KLU}, Sundials.MatrixHandle{Sundials.SparseMatrix}, Nothing})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:1164
[9] __solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, alg::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}, timeseries::Vector{Any}, ts::Vector{Any}, ks::Vector{Any}, recompile::Type{Val{true}}; kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Sundials ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:12
[10] __solve (repeats 5 times)
@ ~/.julia/packages/Sundials/2KP0s/src/common_interface/solve.jl:3 [inlined]
[11] solve_call(_prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing}; merge_callbacks::Bool, kwargs::Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:92
[12] solve_call
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:64 [inlined]
[13] #solve_up#467
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:114 [inlined]
[14] solve_up
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:105 [inlined]
[15] #solve#466
@ ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:102 [inlined]
[16] solve(prob::ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, true, DiffEqBase.NullParameters, ODEFunction{true, typeof(Lotka), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, typeof(Lotka_jac), Nothing, Nothing, SparseMatrixCSC{Float64, Int64}, SparseMatrixCSC{Float64, Int64}, Nothing, Nothing, Nothing, Nothing, Nothing}, Base.Pairs{Symbol, Union{}, Tuple{}, NamedTuple{(), Tuple{}}}, DiffEqBase.StandardODEProblem}, args::CVODE_BDF{:Newton, :KLU, Nothing, Nothing})
@ DiffEqBase ~/.julia/packages/DiffEqBase/V7P18/src/solve.jl:98
[17] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[18] include(fname::String)
@ Base.MainInclude ./client.jl:476
[19] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[20] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[21] macro expansion
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:35 [inlined]
[22] macro expansion
@ /snap/julia/74/share/julia/stdlib/v1.8/Test/src/Test.jl:1363 [inlined]
[23] top-level scope
@ ~/.julia/packages/Sundials/2KP0s/test/runtests.jl:32
[24] include(fname::String)
@ Base.MainInclude ./client.jl:476
[25] top-level scope
@ none:6
[26] eval
@ ./boot.jl:368 [inlined]
[27] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:276
[28] _start()
@ Base ./client.jl:522
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[ Info: 0.044464449958102746
[ Info: 0.1199702927305579
[ Info: 0.19547613550301304
[ Info: 0.2709819782754682
[ Info: 0.34648782104792336
[ Info: 0.4219936638203785
[ Info: 0.5889202251875935
[ Info: 0.7558467865548084
[ Info: 0.9227733479220234
[ Info: 1.0
Test error handling

[CVODES WARNING] CVode
Internal t = 0 and h = 0 are such that t + h = t on the next step. The solver will continue anyway.

[CVODES ERROR] CVode
At t = 0 and h = 0, the corrector convergence test failed repeatedly or with |h| = hmin.

[IDAS ERROR] IDACalcIC
Newton/Linesearch algorithm failed to converge.

Test Summary: | Pass Error Total Time
Common Interface | 20 2 22 3m56.9s
CVODE | 1 1 36.3s
ARKODE | 4 4 44.3s
IDA | 7 7 1m27.7s
Jacobians | 1 1 2 8.3s
Callbacks | 6 6 21.8s
Iterator | None 3.3s
Errors | 1 1 13.3s
Mass Matrix | 1 1 22.0s
ERROR: LoadError: Some tests did not pass: 20 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:31
ERROR: Package Sundials errored during testing

(@v1.8) pkg>

[ChrisRackauckas]

https://github.com/gaelforget/ClimateTasks.jl/blob/master/Project.toml

ClimateTasks.jl is really not updated and it uses a version of JLD that is really old that holds back Compat that holds back your entire system. Do ]rm ClimateTasks and you should be good.

[iajzenszmi]

The two errors seem to be a program logic and data error.
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/common_interface/jacobians.jl:31
[ Info: 0.044464449958102746
[ Info: 0.1199702927305579
[ Info: 0.19547613550301304
[ Info: 0.2709819782754682
[ Info: 0.34648782104792336
[ Info: 0.4219936638203785
[ Info: 0.5889202251875935
[ Info: 0.7558467865548084
[ Info: 0.9227733479220234
[ Info: 1.0
Test error handling

[CVODES WARNING] CVode
Internal t = 0 and h = 0 are such that t + h = t on the next step. The solver will continue anyway.

[CVODES ERROR] CVode
At t = 0 and h = 0, the corrector convergence test failed repeatedly or with |h| = hmin.

[IDAS ERROR] IDACalcIC
Newton/Linesearch algorithm failed to converge.

Test Summary: | Pass Error Total Time
Common Interface | 20 2 22 3m26.6s
CVODE | 1 1 34.6s
ARKODE | 4 4 38.4s
IDA | 7 7 1m15.0s
Jacobians | 1 1 2 7.2s
Callbacks | 6 6 19.5s
Iterator | None 2.8s
Errors | 1 1 11.0s
Mass Matrix | 1 1 18.1s
ERROR: LoadError: Some tests did not pass: 20 passed, 0 failed, 2 errored, 0 broken.
in expression starting at /home/ian/.julia/packages/Sundials/2KP0s/test/runtests.jl:31
ERROR: Package Sundials errored during testing

(@v1.8) pkg> build SUNNonlinearSolver
ERROR: The following package names could not be resolved:

• SUNNonlinearSolver (not found in project or manifest)

(@v1.8) pkg> add SUNNonlinearSolver
ERROR: The following package names could not be resolved:

• SUNNonlinearSolver (not found in project, manifest or registry)

(@v1.8) pkg>

[ChrisRackauckas]

Did you remove the polluting package?

[ViralBShah]

The standard Pkg.test("Sundials") has one test failure out of the box with Julia 1.10

Iterator: Error During Test at /Users/viral/.julia/packages/Sundials/UdHby/test/runtests.jl:76
  Got exception outside of a @test
  LoadError: type #42#44 has no field mass_matrix
  Stacktrace:
    [1] getproperty
      @ ./Base.jl:37 [inlined]
    [2] apply_discrete_callback!
      @ ~/.julia/packages/DiffEqBase/UoaYd/src/callbacks.jl:606 [inlined]
    [3] handle_callbacks!(integrator::Sundials.CVODEIntegrator{1, SciMLBase.NullParameters, ODESolution{Float64, 2, Vector{Vector{Float64}}, Nothing, Nothing, Vector{Float64}, Nothing, ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, false, SciMLBase.NullParameters, ODEFunction{false, SciMLBase.AutoSpecialize, typeof(f_terminate), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED), Nothing, Nothing}, @Kwargs{}, SciMLBase.StandardODEProblem}, CVODE_BDF{:Newton, :Dense, Nothing, Nothing}, SciMLBase.HermiteInterpolation{Vector{Float64}, Vector{Vector{Float64}}, Vector{Vector{Float64}}}, SciMLBase.DEStats, Nothing}, CVODE_BDF{:Newton, :Dense, Nothing, Nothing}, Sundials.var"#42#44"{ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, false, SciMLBase.NullParameters, ODEFunction{false, SciMLBase.AutoSpecialize, typeof(f_terminate), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED), Nothing, Nothing}, @Kwargs{}, SciMLBase.StandardODEProblem}}, Sundials.FunJac{1, Sundials.var"#42#44"{ODEProblem{Vector{Float64}, Tuple{Float64, Float64}, false, SciMLBase.NullParameters, ODEFunction{false, SciMLBase.AutoSpecialize, typeof(f_terminate), LinearAlgebra.UniformScaling{Bool}, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, Nothing, typeof(SciMLBase.DEFAULT_OBSERVED), Nothing, Nothing}, @Kwargs{}, SciMLBase.StandardODEProblem}}, Nothing, Nothing, SciMLBase.NullParameters, Nothing, Nothing, Nothing, Nothing, Nothing}, Nothing, Sundials.DEOptions{DataStructures.BinaryHeap{Float64, DataStructures.FasterForward}, DataStructures.BinaryHeap{Float64, DataStructures.FasterForward}, Vector{Float64}, Vector{Float64}, Nothing, CallbackSet{Tuple{}, Tuple{DiscreteCallback{typeof(u_positive), typeof(terminate!), typeof(SciMLBase.INITIALIZE_DEFAULT), typeof(SciMLBase.FINALIZE_DEFAULT)}}}, Float64, Float64, typeof(DiffEqBase.ODE_DEFAULT_PROG_MESSAGE)}, Sundials.LinSolHandle{Sundials.Dense}, Sundials.MatrixHandle{Sundials.DenseMatrix}, Nothing})
      @ Sundials ~/.julia/packages/Sundials/UdHby/src/common_interface/integrator_utils.jl:26

[ViralBShah]

Also the test output is otherwise full of various warnings, deprecations, etc.

[ChrisRackauckas]

With what versions? ]st?

[ViralBShah]

It's the latest using Julia 1.10.0 and apple silicon.

(@v1.10) pkg> st
Status `~/.julia/environments/v1.10/Project.toml`
  [40e3b903] Clang v0.17.8
  [dde4c033] Metal v1.0.0
  [c3572dad] Sundials v4.23.2
  [29a6e085] Wavelets v0.10.0

[ChrisRackauckas]

If you remove Clang, Metal, and Wavelets and up, what packages move up?

[ViralBShah]

Still failing the same way.

(@v1.10) pkg> up
    Updating registry at `~/.julia/registries/General.toml`
   Installed PreallocationTools ─ v0.4.19
   Installed SciMLBase ────────── v2.24.0
  No Changes to `~/.julia/environments/v1.10/Project.toml`
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [d236fae5] ↑ PreallocationTools v0.4.18 ⇒ v0.4.19
  [0bca4576] ↑ SciMLBase v2.23.2 ⇒ v2.24.0
Precompiling project...
  4 dependencies successfully precompiled in 9 seconds. 83 already precompiled.

(@v1.10) pkg> test Sundials
     Testing Sundials
┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ Pkg.Operations ~/.julia/juliaup/julia-1.10.0+0.aarch64.apple.darwin14/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1813
      Status `/private/var/folders/qj/54cx7lcs2qv9z1b4f_110xb00000gn/T/jl_jmhEA7/Project.toml`
  [2169fc97] AlgebraicMultigrid v0.6.0
  [fa961155] CEnum v0.5.0
  [dfb8ca35] DAEProblemLibrary v0.1.0
  [864edb3b] DataStructures v0.18.16
  [2b5f629d] DiffEqBase v6.146.1
  [f6369f11] ForwardDiff v0.10.36
  [40713840] IncompleteLU v0.2.1
  [961ee093] ModelingToolkit v8.75.0
  [fdc4e326] ODEProblemLibrary v0.1.7
  [aea7be01] PrecompileTools v1.2.0
  [189a3867] Reexport v1.2.2
  [0bca4576] SciMLBase v2.24.0
  [47a9eef4] SparseDiffTools v2.16.0
  [06eadbd4] SparsityTracing v0.2.5
  [c3572dad] Sundials v4.23.2
⌅ [fb77eaff] Sundials_jll v5.2.2+0
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [2f01184e] SparseArrays v1.10.0
  [8dfed614] Test
      Status `/private/var/folders/qj/54cx7lcs2qv9z1b4f_110xb00000gn/T/jl_jmhEA7/Manifest.toml`
  [47edcb42] ADTypes v0.2.6
  [1520ce14] AbstractTrees v0.4.4
⌅ [79e6a3ab] Adapt v3.7.2
  [2169fc97] AlgebraicMultigrid v0.6.0
  [ec485272] ArnoldiMethod v0.2.0
  [4fba245c] ArrayInterface v7.7.0
  [4c555306] ArrayLayouts v1.6.0
  [e2ed5e7c] Bijections v0.1.6
  [62783981] BitTwiddlingConvenienceFunctions v0.1.5
  [fa961155] CEnum v0.5.0
  [2a0fbf3d] CPUSummary v0.2.4
  [00ebfdb7] CSTParser v3.4.1
  [49dc2e85] Calculus v0.5.1
  [d360d2e6] ChainRulesCore v1.21.1
  [fb6a15b2] CloseOpenIntervals v0.1.12
  [861a8166] Combinatorics v1.0.2
  [a80b9123] CommonMark v0.8.12
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.0
  [34da2185] Compat v4.12.0
  [b152e2b5] CompositeTypes v0.1.3
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.4
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [dfb8ca35] DAEProblemLibrary v0.1.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.16
  [e2d170a0] DataValueInterfaces v1.0.0
  [2b5f629d] DiffEqBase v6.146.1
  [459566f4] DiffEqCallbacks v2.36.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.11
  [31c24e10] Distributions v0.25.107
  [ffbed154] DocStringExtensions v0.9.3
⌅ [5b8099bc] DomainSets v0.6.7
  [fa6b7ba4] DualNumbers v0.6.8
  [7c1d4256] DynamicPolynomials v0.5.3
  [4e289a0a] EnumX v1.0.4
  [f151be2c] EnzymeCore v0.6.5
  [d4d017d3] ExponentialUtilities v1.25.0
  [e2ba6199] ExprTools v0.1.10
  [7034ab61] FastBroadcast v0.2.8
  [9aa1b823] FastClosures v0.3.2
  [29a986be] FastLapackInterface v2.0.1
  [1a297f60] FillArrays v1.9.3
  [6a86dc24] FiniteDiff v2.22.0
  [59287772] Formatting v0.4.2
  [f6369f11] ForwardDiff v0.10.36
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [d9f16b24] Functors v0.4.7
⌃ [46192b85] GPUArraysCore v0.1.5
  [c145ed77] GenericSchur v0.5.3
  [c27321d9] Glob v1.3.1
  [86223c79] Graphs v1.9.0
  [3e5b6fbb] HostCPUFeatures v0.1.16
  [34004b35] HypergeometricFunctions v0.3.23
  [615f187c] IfElse v0.1.1
  [40713840] IncompleteLU v0.2.1
  [d25df0c9] Inflate v0.1.4
  [8197267c] IntervalSets v0.7.9
  [92d709cd] IrrationalConstants v0.2.2
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.5.0
  [682c06a0] JSON v0.21.4
  [98e50ef6] JuliaFormatter v1.0.46
  [ccbc3e58] JumpProcesses v9.10.1
⌅ [ef3ab10e] KLU v0.4.1
  [ba0b0d4f] Krylov v0.9.5
  [b964fa9f] LaTeXStrings v1.3.1
  [2ee39098] LabelledArrays v1.15.1
  [984bce1d] LambertW v0.4.6
  [23fbe1c1] Latexify v0.16.1
  [10f19ff3] LayoutPointers v0.1.15
  [50d2b5c4] Lazy v0.15.1
  [5078a376] LazyArrays v1.8.3
  [d3d80556] LineSearches v7.2.0
  [7ed4a6bd] LinearSolve v2.22.1
  [2ab3a3ac] LogExpFunctions v0.3.26
  [bdcacae8] LoopVectorization v0.12.166
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.13
  [d125e4d3] ManualMemory v0.1.8
  [a3b82374] MatrixFactorizations v2.1.0
  [bb5d69b7] MaybeInplace v0.1.1
  [e1d29d7a] Missings v1.1.0
  [961ee093] ModelingToolkit v8.75.0
  [46d2c3a1] MuladdMacro v0.2.4
  [102ac46a] MultivariatePolynomials v0.5.4
  [d8a4904e] MutableArithmetics v1.4.0
  [d41bc354] NLSolversBase v7.8.3
  [2774e3e8] NLsolve v4.5.1
  [77ba4419] NaNMath v1.0.2
  [8913a72c] NonlinearSolve v3.5.4
  [fdc4e326] ODEProblemLibrary v0.1.7
  [6fe1bfb0] OffsetArrays v1.13.0
  [bac558e1] OrderedCollections v1.6.3
  [1dea7af3] OrdinaryDiffEq v6.70.1
  [90014a1f] PDMats v0.11.31
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [e409e4f3] PoissonRandom v0.4.4
  [f517fe37] Polyester v0.7.9
  [1d0040c9] PolyesterWeave v0.2.1
  [d236fae5] PreallocationTools v0.4.19
  [aea7be01] PrecompileTools v1.2.0
  [21216c6a] Preferences v1.4.1
  [1fd47b50] QuadGK v2.9.4
  [e6cf234a] RandomNumbers v1.5.3
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v3.8.0
  [f2c3362d] RecursiveFactorization v0.2.21
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [79098fc4] Rmath v0.7.1
  [7e49a35a] RuntimeGeneratedFunctions v0.5.12
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.42
  [0bca4576] SciMLBase v2.24.0
  [c0aeaf25] SciMLOperators v0.3.7
  [efcf1570] Setfield v1.1.1
  [727e6d20] SimpleNonlinearSolve v1.4.1
  [699a6c99] SimpleTraits v0.9.4
  [ce78b400] SimpleUnPack v1.1.0
  [a2af1166] SortingAlgorithms v1.2.1
  [47a9eef4] SparseDiffTools v2.16.0
  [06eadbd4] SparsityTracing v0.2.5
  [e56a9233] Sparspak v0.3.9
  [276daf66] SpecialFunctions v2.3.1
  [aedffcd0] Static v0.8.10
  [0d7ed370] StaticArrayInterface v1.5.0
  [90137ffa] StaticArrays v1.9.2
  [1e83bf80] StaticArraysCore v1.4.2
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.2
  [4c63d2b9] StatsFuns v1.3.0
  [7792a7ef] StrideArraysCore v0.5.2
  [c3572dad] Sundials v4.23.2
  [2efcf032] SymbolicIndexingInterface v0.3.5
  [d1185830] SymbolicUtils v1.5.0
  [0c5d862f] Symbolics v5.16.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.11.1
  [8290d209] ThreadingUtilities v0.5.2
  [a759f4b9] TimerOutputs v0.5.23
  [0796e94c] Tokenize v0.5.28
  [d5829a12] TriangularSolve v0.1.20
  [410a4b4d] Tricks v0.1.8
  [781d530d] TruncatedStacktraces v1.4.0
  [5c2747f8] URIs v1.5.1
  [3a884ed6] UnPack v1.0.2
  [1986cc42] Unitful v1.19.0
  [a7c27f48] Unityper v0.1.6
  [3d5dd08c] VectorizationBase v0.21.65
  [19fa3120] VertexSafeGraphs v0.2.0
  [1d5cc7b8] IntelOpenMP_jll v2024.0.2+0
  [856f044c] MKL_jll v2024.0.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.5+0
  [f50d1b31] Rmath_jll v0.4.0+0
⌅ [fb77eaff] Sundials_jll v5.2.2+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [4af54fe1] LazyArtifacts
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [1a1011a3] SharedArrays
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.0.5+1
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+2
  [05823500] OpenLibm_jll v0.8.1+2
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.8.0+1
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2

  30 dependencies successfully precompiled in 119 seconds. 190 already precompiled.
  3 dependencies had output during precompilation:
┌ Symbolics → SymbolicsForwardDiffExt
│  ┌ Warning: Module SymbolicsForwardDiffExt with build ID ffffffff-ffff-ffff-0001-b9bcfa1b6db1 is missing from the cache.
│  │ This may mean SymbolicsForwardDiffExt [4a213a23-c09c-5cde-9712-b631ad2c72df] does not support precompilation but is imported by a module that does.
│  └ @ Base loading.jl:1942
│  ┌ Error: Error during loading of extension SymbolicsForwardDiffExt of Symbolics, use `Base.retry_load_extensions()` to retry.
│  │   exception =
│  │    1-element ExceptionStack:
│  │    Declaring __precompile__(false) is not allowed in files that are being precompiled.
│  │    Stacktrace:
│  │      [1] _require(pkg::Base.PkgId, env::Nothing)
│  │        @ Base ./loading.jl:1946
│  │      [2] __require_prelocked(uuidkey::Base.PkgId, env::Nothing)
│  │        @ Base ./loading.jl:1806
│  │      [3] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │      [4] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │      [5] _require_prelocked
│  │        @ Base ./loading.jl:1797 [inlined]
│  │      [6] _require_prelocked
│  │        @ Base ./loading.jl:1796 [inlined]
│  │      [7] run_extension_callbacks(extid::Base.ExtensionId)
│  │        @ Base ./loading.jl:1289
│  │      [8] run_extension_callbacks(pkgid::Base.PkgId)
│  │        @ Base ./loading.jl:1324
│  │      [9] run_package_callbacks(modkey::Base.PkgId)
│  │        @ Base ./loading.jl:1158
│  │     [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
│  │        @ Base ./loading.jl:1813
│  │     [11] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │     [12] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │     [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
│  │        @ Base ./loading.jl:1797
│  │     [14] macro expansion
│  │        @ Base ./loading.jl:1784 [inlined]
│  │     [15] macro expansion
│  │        @ Base ./lock.jl:267 [inlined]
│  │     [16] __require(into::Module, mod::Symbol)
│  │        @ Base ./loading.jl:1747
│  │     [17] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │     [18] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │     [19] require(into::Module, mod::Symbol)
│  │        @ Base ./loading.jl:1740
│  │     [20] include
│  │        @ Base ./Base.jl:495 [inlined]
│  │     [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
│  │        @ Base ./loading.jl:2216
│  │     [22] top-level scope
│  │        @ stdin:3
│  │     [23] eval
│  │        @ Core ./boot.jl:385 [inlined]
│  │     [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│  │        @ Base ./loading.jl:2070
│  │     [25] include_string
│  │        @ Base ./loading.jl:2080 [inlined]
│  │     [26] exec_options(opts::Base.JLOptions)
│  │        @ Base ./client.jl:316
│  │     [27] _start()
│  │        @ Base ./client.jl:552
│  └ @ Base loading.jl:1295
└  
┌ ModelingToolkit
│  WARNING: using deprecated binding Symbolics.@register in ModelingToolkit.
│  , use @register_symbolic instead.
└  
┌ Symbolics → SymbolicsPreallocationToolsExt
│  ┌ Warning: Module SymbolicsPreallocationToolsExt with build ID ffffffff-ffff-ffff-0001-b9bc01f83b61 is missing from the cache.
│  │ This may mean SymbolicsPreallocationToolsExt [d479e226-fb54-5ebe-a75e-a7af7f39127f] does not support precompilation but is imported by a module that does.
│  └ @ Base loading.jl:1942
│  ┌ Error: Error during loading of extension SymbolicsPreallocationToolsExt of Symbolics, use `Base.retry_load_extensions()` to retry.
│  │   exception =
│  │    1-element ExceptionStack:
│  │    Declaring __precompile__(false) is not allowed in files that are being precompiled.
│  │    Stacktrace:
│  │      [1] _require(pkg::Base.PkgId, env::Nothing)
│  │        @ Base ./loading.jl:1946
│  │      [2] __require_prelocked(uuidkey::Base.PkgId, env::Nothing)
│  │        @ Base ./loading.jl:1806
│  │      [3] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │      [4] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │      [5] _require_prelocked
│  │        @ Base ./loading.jl:1797 [inlined]
│  │      [6] _require_prelocked
│  │        @ Base ./loading.jl:1796 [inlined]
│  │      [7] run_extension_callbacks(extid::Base.ExtensionId)
│  │        @ Base ./loading.jl:1289
│  │      [8] run_extension_callbacks(pkgid::Base.PkgId)
│  │        @ Base ./loading.jl:1324
│  │      [9] run_package_callbacks(modkey::Base.PkgId)
│  │        @ Base ./loading.jl:1158
│  │     [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
│  │        @ Base ./loading.jl:1813
│  │     [11] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │     [12] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │     [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
│  │        @ Base ./loading.jl:1797
│  │     [14] macro expansion
│  │        @ Base ./loading.jl:1784 [inlined]
│  │     [15] macro expansion
│  │        @ Base ./lock.jl:267 [inlined]
│  │     [16] __require(into::Module, mod::Symbol)
│  │        @ Base ./loading.jl:1747
│  │     [17] #invoke_in_world#3
│  │        @ Base ./essentials.jl:921 [inlined]
│  │     [18] invoke_in_world
│  │        @ Base ./essentials.jl:918 [inlined]
│  │     [19] require(into::Module, mod::Symbol)
│  │        @ Base ./loading.jl:1740
│  │     [20] include
│  │        @ Base ./Base.jl:495 [inlined]
│  │     [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
│  │        @ Base ./loading.jl:2216
│  │     [22] top-level scope
│  │        @ stdin:3
│  │     [23] eval
│  │        @ Core ./boot.jl:385 [inlined]
│  │     [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
│  │        @ Base ./loading.jl:2070
│  │     [25] include_string
│  │        @ Base ./loading.jl:2080 [inlined]
│  │     [26] exec_options(opts::Base.JLOptions)
│  │        @ Base ./client.jl:316
│  │     [27] _start()
│  │        @ Base ./client.jl:552
│  └ @ Base loading.jl:1295
└  

[ChrisRackauckas]

There is no failure. That's a Julia level bug that's really annoying but doesn't cause any actual issues with usage.

Closing since there isn't much more to do here.