Skip to content

Pull requests: OpenGene/fastp

New pull request New
18 Open 52 Closed
18 Open 52 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Assigned to nobody Loading
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

Verify polyX trimming occurs after adapter trimming (already fixed)
#636 opened Oct 11, 2025 by Copilot AI • Draft
1
@sfchen
Makefile: Respect build environment, add destdir support
#619 opened Jun 21, 2025 by outpaddling Loading…
1
Use EX_USAGE for missing arguments in main()
#615 opened Jun 17, 2025 by hayzamjs Loading…
feat: sets trim-poly-G as True for one-color-system too (iSeq 100)
#598 opened Feb 20, 2025 by Coppini Loading…
1
Added a new function(umi_skipb) to the program to skip the specified bp number before trim the UMI sequence.
#550 opened Mar 8, 2024 by biolxy Loading…
minor typo fix
#546 opened Feb 12, 2024 by Gaura Loading…
2
cuting doesn't interfere with deduplication
#545 opened Feb 9, 2024 by SilasK Loading…
Fix typo
#544 opened Feb 6, 2024 by fplazaonate Loading…
2
check read errors in fastqreader
#533 opened Nov 15, 2023 by jchorl Loading…
Add a Docker container
#527 opened Oct 11, 2023 by maol-corteva Loading…
3
Remove the hardcoded trim tail and trim front length limitations
#525 opened Oct 2, 2023 by shinthor Loading…
1
Fix ReadPair's never being freed
#515 opened Aug 15, 2023 by Donwulff Loading…
1
Update list of sequencers for poly-g trimming
#508 opened Jul 14, 2023 by semenko Loading…
6
Fix for 2 bugs in the fastq reader:
#497 opened Jun 15, 2023 by wdu Loading…
fix average q-score calculation
#495 opened May 31, 2023 by DrinnanSante Loading…
[Bug] Handle empty output from fastp
#482 opened Apr 26, 2023 by rzlim08 Loading…
2
rem useless files
#476 opened Mar 24, 2023 by KimBioInfoStudio Loading…
1
Add args for adjusting mismatch number
#311 opened Jan 4, 2021 by y9c Loading…
1
ProTip! Find all pull requests that aren't related to any open issues with -linked:issue.