Project Module 2024 - Introduction to Gene Expression Analysis using RNAseq Data

Mary-Ann Blätke ([email protected]) Jedrzej Jakub Szymanski ([email protected])

Please feel free to contact us in case of question or if you are interest in a bachelors/masters/PhD Project.

Name		Name	Last commit message	Last commit date
Latest commit History 23 Commits
Day1_1_From_Gene_To_Transcript.pdf		Day1_1_From_Gene_To_Transcript.pdf
Day1_2_Bash_Crash_Course.pdf		Day1_2_Bash_Crash_Course.pdf
Day1_2_RNAseq_Technology.pdf		Day1_2_RNAseq_Technology.pdf
Day2_2_Databases.pdf		Day2_2_Databases.pdf
Day2_and_Day3_1_Read_Maappingpdf.pdf		Day2_and_Day3_1_Read_Maappingpdf.pdf
Day_4_Data_Normalization.pdf		Day_4_Data_Normalization.pdf
Day_4_units_of_gene_expression.pdf		Day_4_units_of_gene_expression.pdf
LICENSE		LICENSE
Lecture_ML_AI_in_Plant_Science.pdf		Lecture_ML_AI_in_Plant_Science.pdf
QBIO_Step1_TxImport.R		QBIO_Step1_TxImport.R
QBIO_Step2_dataWrangling.R		QBIO_Step2_dataWrangling.R
QBIO_Step3_multivariate.R		QBIO_Step3_multivariate.R
QBIO_Step4_diffGenes.R		QBIO_Step4_diffGenes.R
README.md		README.md
SRR15244997_1_fastqc.html		SRR15244997_1_fastqc.html
SRR15244997_2_fastqc.html		SRR15244997_2_fastqc.html
SRR15244997_trimmed_1_fastqc.html		SRR15244997_trimmed_1_fastqc.html
SRR15244997_trimmed_2_fastqc.html		SRR15244997_trimmed_2_fastqc.html
install_packages		install_packages
mapped_data.zip		mapped_data.zip
missing_libraries.txt		missing_libraries.txt
script_ENA_get_data.sh		script_ENA_get_data.sh
script_R_analysis.R		script_R_analysis.R
script_combined.sh		script_combined.sh
script_kallisto.sh		script_kallisto.sh
script_master.sh		script_master.sh
script_qc.sh		script_qc.sh
studydesign.txt		studydesign.txt
tomato_experiments.csv		tomato_experiments.csv
trimming_reads.sh		trimming_reads.sh

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