Is an ongoing project designed to create two simple assays for testing the optomotor and optokinetic response of larval fishes. Currently, known methods for creating graphics to test visual response of larval fish utilizes code for paid licences programs like MatLab. I was tasked with the job of creating a simplified and free alternative for the students in my lab to use for their undergraduate and graduate projects. OptoGraphs is a series of R scripts utilizing two methods for creating .gif graphics using two open source resources (ImageJ & ImageMagick).
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Two R functions were designed to create two simple assays for testing the Optomotor and optokinetic response of larval fish. This is short vignette to describe the steps of two methods to create a .gif image in R. The first method, described in the Circular Assay, is by creating several .png images and turning them into .gif or .avi files using …
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EvaFro/OptoGraphs
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Two R functions were designed to create two simple assays for testing the Optomotor and optokinetic response of larval fish. This is short vignette to describe the steps of two methods to create a .gif image in R. The first method, described in the Circular Assay, is by creating several .png images and turning them into .gif or .avi files using …
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