Fix typos in tutorials

docs/tutorials/simulation.md

@@ -139,7 +139,7 @@ ana = cript.Computation.create(
 !!! note
     Notice the use of `create()` here, which instantiates and saves the object in one go.
 
-### Create and upload Files
+### Create and Upload Files
 First, we'll instantiate our File nodes.
 ``` py
 packing_file = cript.File(project=proj, source="path/to/local/file")
@@ -177,7 +177,7 @@ forcefield_data = cript.Data.create(
     type = "computation_forcefield",
     files = [forcefield_file],
     computations = [init],
-    notes = "Full forcefield defintiona and topology.",
+    notes = "Full forcefield definition and topology.",
 )
 equi_snap = cript.Data.create(
     experiment = expt,

docs/tutorials/synthesis.md

@@ -179,7 +179,7 @@ prcs.save()
 ```
 
 ### Create a File node and upload a file
-First, we'll instantiate a File node and associate with the Data node created above.
+First, we'll instantiate a File node and associate it with the Data node created above.
 ``` py
 path = "path/to/local/file"
 f = cript.File(project=proj, source=path)
@@ -217,7 +217,7 @@ Next, we'll add the Data node to the new Property node.
 ``` py
 mw_n.data = sec
 ```
-Last, we'll add the new Property node to polystyrene then save it.
+Last, we'll add the new Property node to polystyrene and then save it.
 ``` py
 polystyrene.add_property(mw_n)
 polystyrene.save()

src/cript/api/rest.py

@@ -110,7 +110,7 @@ def post(self, url: str, data: str = None, valid_codes: list = [201]):
         return json.loads(response.content)
 
     @beartype
-    def put(self, url: str, data: str = None,valid_codes: list = [200]):
+    def put(self, url: str, data: str = None, valid_codes: list = [200]):
         """Performs an HTTP PUT request and handles errors."""
         url = convert_to_api_url(url)
         response = self.session.put(url=url, data=data)

src/cript/data_model/nodes/reference.py

@@ -66,7 +66,6 @@ def save(self, get_level: int = 1, update_existing: bool = False):
         """
         api = get_cached_api_session(self.url)
 
-
         # Create a new object via POST
         response = api.post(
             url=f"{api.url}/{self.slug}/",
@@ -87,4 +86,4 @@ def save(self, get_level: int = 1, update_existing: bool = False):
 
         set_node_attributes(self, response)
         self._generate_nested_nodes(get_level=get_level)
-        logger.info(f"{self.node_name} node has been saved to the database.")
+        logger.info(f"{self.node_name} node has been saved to the database.")