IMJ-PLUS

This repo holds the codes for IMJ-PLUS.

1. Environmental Requirements

To run the reconstruction demo, the following dependencies are required:

• Python 3.8
• PyTorch 2.0.1
• torchkbnufft 1.4.0
• tiny-cuda-nn 1.7
• imageio 2.33.0
• torchvision, tensorboard, h5py, scikit-image, tqdm, numpy, scipy

2. Sample Data

Download the sample data from https://drive.google.com/file/d/19nY5O27XB-LglJgHX-N7tsZgyhiMTTAi/view?usp=sharing and put it into the corresponding directory

3. Files Descriptions

└── IMJ-PLUS/  
      ├── run_demo.py                     # Code to demo how to use IMJ-PLUS for reconstruction
      ├── IMJPLUS.pyc                     # Perform IMJ-PLUS reconstruction
      └── utils.pyc                       # Some supporting functions

4. Usage

To test the performance of IMJ-PLUS, run the following command:

python run_demo.py -g 0 -s 21