hts-sys hts-sys-v2.0.1

This is a dummy release for technical reasons: we needed to decouple the hts-sys version from htslib, such that it becomes easier to apply custom fixes while keeping a semantic versioning scheme in the future.

hts-sys hts-sys-v2.0.0

⚠ BREAKING CHANGES

• dummy major version bump to move away from previous versions that were following htslib versions.

Bug Fixes

• dummy major version bump to move away from previous versions that were following htslib versions. (aaa70a8)

hts-sys hts-sys-v1.0.0

⚠ BREAKING CHANGES

• bump to new major version (for technical reasons).
• dummy breaking change to increase hts-sys major version.

Bug Fixes

• bump to new major version (for technical reasons). (9c6db30)
• dummy breaking change to increase hts-sys major version. (93415cb)
• dummy changes (3af5ede)
• update changelog (deef08f)

hts-sys hts-sys-v0.1.0

Bug Fixes

• dummy release

Version 1.11.1-fix2 of hts-sys

Dummy release for technical reasons.

Version 0.37.0

Added

• bcf::Record methods end, clear, and rlen (@mbhall88).

Changes

• bcf::IndexReader::fetch parameter end is now an Option<u64>. This is inline with
  htslib regions, which do not require an end position (@mbhall88)
• Removed unused dependencies (@sreenathkrishnan).
• Improved documentation (@mbhall88).
• Improved error message when failing to load index files (@johanneskoester).
• Improved API for accessing AUX fields in BAM records (@jch-13).
• Fixed compiler warnings (@fxwiegand).
• BAM header representation is now always kept in sync between textual and binary (@jch-13).

Version 0.36.0

Changes

• Improved genotype API in VCF/BCF records (@malthesr).
• Read pair orientation inference for BAM records (@johanneskoester).

Version 0.35.2

This release contains a fix for problems with semantic versioning in Cargo when specifying the hts-sys dependency.

Version 0.35.1

• Fixed wrongly define missing value constants in bcf::record (@johanneskoester).
• Bump hts-sys depedency to the latest version, containing build fixes for macOS (@johanneskoester).

Version 0.35.0

Changes

• BREAKING: info and format field access in BCF records now allocates a separate buffer each time. In addition, it is also possible to pass a buffer that has been created manually before (@johanneskoester)
• Fixes for building on macOS (@brainstorm)

Added

• ability to push genotypes into BCF record (@malthesr, @tedil).